Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Identifying genes exhibiting cycling pattern at mRNA level in LNvs at different food/temperature conditions

ABSTRACT: Identifying genes exhibiting cycling pattern at mRNA level in LNvs at different food/temperature conditions

PROVIDER: PRJNA562884 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Identifying genes exhibiting cycling pattern at mRNA level in LNvs at different food/temperature conditions

Project description:We applied RNA-seq to FACS sorted LNvs (circadian neurons) w1118 flies (expressing mGFP in the LNv neurons) to look at gene expression pattern at different time of the day under different food/temperature conditions.

2019-09-06 | GSE136378 | GEO

Stability of miRNA in FFPE tumour samples exhibiting degraded mRNA

Project description:This SuperSeries is composed of the following subset Series: GSE39013: Stability of miRNA in FFPE tumour samples exhibiting degraded mRNA [Cervix samples series 1] GSE39014: Stability of miRNA in FFPE tumour samples exhibiting degraded mRNA [Cervix samples series 2] GSE39015: Stability of miRNA in FFPE tumour samples exhibiting degraded mRNA [Cervix samples miRNA] GSE39016: Stability of miRNA in FFPE tumour samples exhibiting degraded mRNA [Bladder samples] GSE39066: Stability of miRNA in FFPE tumour samples exhibiting degraded mRNA [cell lines] Refer to individual Series

2012-07-03 | E-GEOD-39067 | biostudies-arrayexpress

Identifying Zmat3-bound RNAs

Project description:Identifying Zmat3-bound RNAs

| PRJNA607540 | ENA

Genome-wide differential binding pattern of NFKB2/p52 under prolonged culture conditions

Project description:We report the application of ChIP-Seq analysis for high-throughput profiling of NFKB2/p52 binding pattern under prolonged culture conditions. Briefly, we investigate the genome wide binding behavior of endogenous p52 in WI-38 cells. The cells was cultured with regular DMEM medium for prolonged time (7 days). Chromatin immunoprecipitated DNA was converted to libraries for sequencing with HiSeq 4000. We find that there is a distinct binding pattern of p52 under prolonged culture condtion. This study provides a preliminary but solid basis to our understanding of NFKB2/p52 binding dynamics during aging process.

2022-04-13 | GSE182248 | GEO

Dynamic wrinkling pattern exhibiting tunable fluorescence for anticounterfeiting applications.

Project description: Not available

| S-EPMC7156701 | biostudies-literature

Identification of proteins exhibiting TgDegP2-responsive thermal stability

Project description:To broadly explore artemisinin susceptibility in apicomplexan parasites, we used genome-scale CRISPR screens recently developed for Toxoplasma gondii to discover sensitizing and desensitizing mutations. From these screens, we identified the mitochondrial protease DegP2, which appeared gDegP2-responsive thermal stability in a pathway leading to decreased DHA susceptibility. To identify proteins exhibiting DegP2-responsive thermal stability

2020-08-28 | PXD019917 | Pride

Analysis of splicing pattern and gene expression level of Matrin3 knockdown.

Project description:We identified RNA targets of Matrin3 using SH-SY5Y by PAR-CLIP analysis. Because Matrin3 mainly bound to intron of pre-mRNA, in order to find the effect of Matrin3 on splicing pattern and expression, we knocked down Matrin3 using SH-SY5Y cells by electroporation and extracted total RNAs from those cells. The total RNAs were subjected to whole transcripts microarray GeneChip® Affymetrix Human Transcriptome array 2.0.

2017-07-12 | GSE86967 | GEO

Permafrost response to temperature rise in carbon and nutrient cycling: Effects from habitat-specific conditions and factors of warming.

Project description: Not available

| S-EPMC8601908 | biostudies-literature

Transcription profiling of human ALL exhibiting cross-resistance to prednisolone, vincristine, asparaginase and daunorubicinchemotherapy cross-resistance and treatment response in childhood acute lymphoblastic leukemia

Project description:Acute lymphoblastic leukemia (ALL) can be cured with combination chemotherapy in over 75% of children, but the cause of treatment failure in the remaining patients is unknown. We determined the sensitivity of ALL cells to individual antileukemic agents in 441 patients, and used a genome-wide approach to identify 45 genes differentially expressed in ALL exhibiting cross-resistance to prednisolone, vincristine, asparaginase and daunorubicin. We also identified a distinct phenotype of discordant resistance to asparaginase and vincristine and 139 genes whose expression was associated with this novel phenotype. The expression of these genes discriminated treatment outcome in two independent patient populations, identifying a subset of patients with a markedly inferior outcome (37%Â±13% 5-year DFS).

2008-06-12 | E-GEOD-2351 | biostudies-arrayexpress

Homo sapiens

Project description:Identifying genomic loci exhibiting chromatin decompaction upon loss of MORC2

| PRJNA377247 | ENA