Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Targeted microarray analysis of two symbiotic cyanobacterial diazotroph strains in the western tropical North Atlantic

ABSTRACT: Targeted microarray analysis of two symbiotic cyanobacterial diazotroph strains in the western tropical North Atlantic

PROVIDER: PRJNA580392 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Targeted microarray analysis of two symbiotic cyanobacterial diazotroph strains in the western tropical North Atlantic

Project description:We designed a new specific mRNA microarray targeting a subset of genes (956) of the diazotrophs Richelia intracellularis and Calothrix rhizosoleniae (genomes RintRC01, RintHH01, RintHM01 and CalSC01) which associate with diatom hosts. The aim was to be able to describe the gene expressions of genes related to several metabolic pathways, specifically nitrogen fixation and how they possibly differed between the closely related strains based on environment and host association. In this study we focused on the RintRC01 and RintHH01. To better understand how the gene expression of nitrogen fixation genes relates to nitrogen fixation rates both gene expression and rate measurements were done in parallell.

2019-10-31 | GSE139589 | GEO

Targeted microarray analysis of three symbiotic cyanobacterial diazotroph strains in the South China Sea

Project description:Targeted microarray analysis of three symbiotic cyanobacterial diazotroph strains in the South China Sea

| PRJNA580393 | ENA

Piecewise Structural Equation Model (SEM) Disentangles the Environmental Conditions Favoring Diatom Diazotroph Associations (DDAs) in the Western Tropical North Atlantic (WTNA).

Project description: Not available

| S-EPMC5423296 | biostudies-literature

Tropical Western Atlantic lithistids

Project description:Systematics of ‘lithistid’ tetractinellid demosponges from the Tropical Western Atlantic – implications for phylodiversity and bathymetric distribution

| PRJEB33629 | ENA

Targeted microarray analysis of three symbiotic cyanobacterial diazotroph strains in the South China Sea

Project description:We designed a new specific mRNA microarray targeting a subset of genes (748) of the diazotrophs Richelia intracellularis and Calothrix rhizosoleniae (genomes RintRC01, RintHH01, RintHM01 and CalSC01) which associate with diatom hosts. The aim was to be able to describe the gene expressions of genes related to several metabolic pathways and how they possibly differed between the closely related strains based on environment and host association. To better understand how the different environments might affect gene expressions, the samples were taken in depth profiles, at night and day, during a cruise in the South China Sea.

2019-10-31 | GSE139588 | GEO

Mesozooplankton Graze on Cyanobacteria in the Amazon River Plume and Western Tropical North Atlantic.

Project description: Not available

| S-EPMC5540951 | biostudies-literature

Asymmetric response of tropical cyclone activity to global warming over the North Atlantic and western North Pacific from CMIP5 model projections.

Project description: Not available

| S-EPMC5278409 | biostudies-literature

Small phytoplankton dominate western North Atlantic biomass.

Project description: Not available

| S-EPMC7305139 | biostudies-literature

Spurious North Tropical Atlantic precursors to El Nino.

Project description: Not available