Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudooceanicola pacificus strain:216_PA32_1

ABSTRACT: Pseudooceanicola pacificus Genome sequencing and assembly

PROVIDER: PRJNA590813 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Pseudooceanicola

Project description:Genus Pseudooceanicola Genome sequencing and assembly

| PRJNA398618 | ENA

Pseudooceanicola sp. 502str34

Project description:Pseudooceanicola sp. 502str34 Genome sequencing and assembly

| PRJNA601284 | ENA

Histone modification profile of Pristionchus pacificus

Project description:Pristionchus pacificus has emerged as a valuable model system for comparative and evolutionary-developmental biology (evo-devo) studies alongside the classic model nematode C. elegans. Previous studies have identified a lack of conservation of genetic networks underlying conserved traits, referred to as developmental systems drift. However, the conservation – or lack thereof – of epigenetic pathways which regulate development have not been investigated. In the manuscript associated with this study, we present an “epigenetic toolkit” for P. pacificus and C. elegans to compare and contrast epigenetic pathways. Assembly of this toolkit was done by identifying orthologous genes, including the “writers” and “erasers” of histone modifications. To complement this evolutionary approach, here we produce a data set of the suite of histone modifications present in P. pacificus.

2024-03-14 | PXD046748 | Pride

Pseudooceanicola

Project description:Pseudooceanicola sp. overview

| PRJNA529939 | ENA

Pseudooceanicola endophyticus strain:CBS1P-1

Project description:Pseudooceanicola endophyticus strain:CBS1P-1 Genome sequencing and assembly

| PRJNA734140 | ENA

Pseudooceanicola atlanticus strain:22II-s11g

Project description:Pseudooceanicola atlanticus strain:22II-s11g Genome sequencing and assembly

| PRJNA196736 | ENA

Pseudooceanicola algae strain:Lw-13e

Project description:Pseudooceanicola algae strain:Lw-13e Genome sequencing and assembly

| PRJNA449592 | ENA

Pseudooceanicola onchidii strain:XY-99

Project description:Pseudooceanicola onchidii strain:XY-99 Genome sequencing and assembly

| PRJNA529519 | ENA

Lizard feeding enhances Ixodes pacificus vector competence

Project description:Ixodes pacificus, the vector of Borrelia burgdorferi (Bb) on the west coast, feeds on a variety of hosts including rodents, birds, and lizards. While rodents are reservoirs for Bb and can infect juvenile ticks, lizards are Bb-refractory. Despite the range of bloodmeals for I. pacificus, it is undetermined how larval host bloodmeal identity may affect future nymphal vector competence. Here, we conducted a transcriptome analysis on I. pacificus to determine whether and through what mechanisms host bloodmeal history affects vector competency of I. pacificus for the Lyme disease pathogen.

2021-04-27 | GSE173109 | GEO

Pseudooceanicola sp. GBMRC 2024

Project description:Pseudooceanicola sp. GBMRC 2024 Genome sequencing and assembly

| PRJNA597704 | ENA