Metagenome
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA593905 | ENA |
REPOSITORIES: ENA
Similar Datasets
Project description:Metagenome-assembled genomes (MAGs) of yak fecal microbiota
| PRJNA641528 | ENA
Project description:Metagenome assembled genomes (MAGs) from Gulf of Kutch pelagic sediments
| PRJNA598416 | ENA
Project description:Metagenome assembled genomes (MAGs) from Gulf of Khambhat pelagic sediments
| PRJNA598413 | ENA
Project description:<p>A variety of anthropogenic organohalide contaminants generated from industry are released into the environment, and thus cause serious pollution that endangers human health. In the present study, we investigated the microbial community composition of industrial saponification wastewater using 16S rRNA sequencing, providing genomic insights of potential organohalide dehalogenation bacteria (OHDBs) by whole-metagenome sequencing. We also explored yet-to-culture OHDBs involved in the microbial community. Microbial diversity analysis reveals that Proteobacteria and Patescibacteria phyla dominate microbiome abundance of the wastewater. In addition, a total of six bacterial groups (Rhizobiales, Rhodobacteraceae, Rhodospirillales, Flavobạcteriales, Micrococcales, and Saccharimonadales) were found as biomarkers in the key organohalide removal module. Ninety-four metagenome-assembled genomes (MAGs) were reconstructed from the microbial community, and 105 hydrolytic dehalogenase genes within 42 MAGs were identified, suggesting that the potential for hydrolytic organohalide dehalogenation is present in the microbial community. Subsequently, we characterized the organohalide dehalogenation of an isolated OHDB, Microbacterium sp. J1-1, which shows the dehalogenation activities of chloropropanol, dichloropropanol, and epichlorohydrin. This study provides a community-integrated multi-omics approach to gain functional OHDBs for industrial organohalide dehalogenation.</p>
2022-11-21 | MTBLS3916 | MetaboLights
Project description:metagenome-assembled genomes (MAGs) from mangrove sediment, seagrass sediment, estuary sediment and oilfield samples
| PRJNA680430 | ENA
Project description:North Sea spring phytoplankton bloom metagenome assemblies and metagenome assembled genomes (MAGs)
| PRJEB28156 | ENA
Project description:Brothers Volcano 16S rRNA gene amplicon sequencing and metagenome-assembled genomes (MAGs) sequencing and assembly
| PRJNA546572 | ENA