Project description:The double-stranded RNA binding protein Staufen2 (Stau2) is asymmetrically localized and segregated during asymmetric cell divisions in the developing mouse cortex and promotes intermediate progenitor cell fate. We carry out RNA immunoprecipitation with a Stau2 specific antibody, followed by microarray analysis to identify Stau2 assoicated RNAs that may be shuttled asymmetrically into one daughter cell thus affecting cell fate. Cortex was dissected from E13-14 timed-pregnant Swiss Webster Mice (Taconic) and RNA immunoprecipitation followed by microarray analysis was carried out to identy Stau2 associated RNA cargos.

2012-12-21 | E-GEOD-38222 | biostudies-arrayexpress

Stau2 RIP-Chip in Mouse E13-14 Cortex

2012-12-21 | GSE38222 | GEO

CRISPR RNA-seq from K562 (ENCSR898KNS)

Project description:RNA-seq on K562 cells treated with a CRISPR gRNA against STAU2. (STAU2-BGKcLV11) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE178044 | GEO

Effect of LSD1 knockdown on histone H3K4 methylation in HEL human erythroleukemia cell line.

Project description:To understand the role of LSD1 in regulating histone H3K4 methylation status, ChIP-seq analyse of mono- and di-methylated H3K4 in LSD1-KD HEL cells were performed. The analyses revealed demethylation of H3K4me1 and H3K4me2 by LSD1 at regulatory regions including CEBPA gene enhancer.

2021-05-04 | GSE145399 | GEO

H3K4 Me3 occupancy of Control and AMPK knockdown Hep3B cells

Project description:H3K4 Me3 occupancy of Control and AMPK knockdown Hep3B cells

2022-03-26 | GSE97189 | GEO

Effect of LSD1 knockdown on histone H3K4 methylation in HEL human erythroleukemia cell line.

Project description:Effect of LSD1 knockdown on histone H3K4 methylation in HEL human erythroleukemia cell line.

| PRJNA607081 | ENA

CRISPR-Cas9 knockdown of RBM48 in K562 cells

Project description:CRISPR-Cas9 knockdown of RBM48 in K562 cells

| PRJNA658070 | ENA