Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Geodermatophilus nigrescens strain:CPCC 205238 I12A-02620

ABSTRACT: Geodermatophilus nigrescens strain:CPCC 205238 I12A-02620 Genome sequencing

PROVIDER: PRJNA630850 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Geodermatophilus nigrescens strain:CPCC 205239 K1A690

Project description:Geodermatophilus nigrescens strain:CPCC 205239 K1A690 Genome sequencing

| PRJNA630889 | ENA

Geodermatophilus amargosae strain:CPCC 205244 I12A-02622

Project description:Geodermatophilus amargosae strain:CPCC 205244 I12A-02622 Genome sequencing

| PRJNA630843 | ENA

Geodermatophilus nigrescens

Project description:Geodermatophilus nigrescens overview

| PRJNA734398 | ENA

Geodermatophilus normandii strain:I12A-02606

Project description:Geodermatophilus normandii strain:I12A-02606 Genome sequencing and assembly

| PRJNA578226 | ENA

Geodermatophilus sabuli strain:I12A-02694

Project description:Geodermatophilus sabuli strain:I12A-02694 Genome sequencing and assembly

| PRJNA578230 | ENA

Modestobacter lapidis strain:CPCC 205249 I12A-02577

Project description:Modestobacter lapidis strain:CPCC 205249 I12A-02577 Genome sequencing

| PRJNA630845 | ENA

Geodermatophilus nigrescens strain:DSM 45408 | isolate:DSM 45408

Project description:Geodermatophilus nigrescens DSM 45408 genome sequencing

| PRJNA331481 | ENA

Blastococcus aggregatus CPCC 205347 I12A-02691

Project description:Blastococcus aggregatus CPCC 205347 I12A-02691 genome sequencing

| PRJNA630218 | ENA

Comparative transcriptome analysis reveals the mechanism of cross-protection against Verticillium wilt conferred on sunflower by hypovirulent strain Gibellulopsis nigrescens Vn-1

Project description:Background: Hypovirulent fungal strain Gibellulopsis nigrescens Vn-1 cross-protects sunflower against Verticillium wilt. To discover the mechanism of cross-protection by this hypovirulent strain, we analyzed defense enzyme activities and transcriptomes of root samples infected with virulent and hypovirulent strains. Results: Defense enzyme activities increased after inoculation, with the highest levels observed 24 h post-inoculation. At the same time, defense enzyme gene expressions were upregulated, and H2O2 accumulation decreased. A comparative transcriptome analysis revealed that there are 23 GO terms significantly enriched in the Vn-1 group compared with the control, including three specific oxidoreductase-related and four signaling related GO terms. In addition, there were 7 KEGG pathway only enriched in V33 group compared with the control, and 3 KEGG pathway (Alanine, aspartate and glutamate metabolism, Cutin, suberine and wax biosynthesis and Ribosome) only enriched in Vn-1 compared with the control. Conclusions: According to our results, both hypovirulent strain G. nigrescens Vn-1 and virulent strain V. dahliae V33 can reduce levels of reactive oxygen species in sunflower seedling by regulating HaCAT and HaPOD expression. Twenty three GO terms and three KEGG pathway contribute to the formation of specific resistance against virulent strain V. dahliae V33.

2024-05-01 | GSE173745 | GEO

Prevotella nigrescens

Project description:Prevotella nigrescens overview

| PRJNA43153 | ENA