Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Immune phenotyping of diverse syngeneic murine brain tumors identifies immunologically distinct types

ABSTRACT: Immune phenotyping of diverse syngeneic murine brain tumors identifies immunologically distinct types

PROVIDER: PRJNA635791 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Immune phenotyping of diverse syngeneic murine brain tumors identifies immunologically distinct types.

Project description: Not available

| S-EPMC7411074 | biostudies-literature

Immune phenotyping of diverse syngeneic murine brain tumors identifies immunologically distinct types

Project description:Whole tissue RNA-seq analysis of end-stage brain tumor tissue collected from 4 different syngenic murine glioblastoma models at end-stage compared with naïve brain tissue.

2020-06-16 | GSE151414 | GEO

Whole genome analysis of skin from three immunologically diverse mouse models

Project description:Whole genome analysis of skin from three immunologically diverse mouse models

| PRJNA488456 | ENA

Proteomics of Mouse Syngeneic Models

Project description:The cell line-derived xenografts and patient derived xenografts have limited use in cancer immunotherapy evaluation because an immune compromised host is required for xenotransplantation. Syngeneic mouse models are derived by transplanting established mouse cell lines or tumor tissues to strain matched mouse hosts, which are better suited to study the interplay between immune and tumor cells. We investigated the differences as well as similarities of a panel of ten mouse syngeneic models to features of human tumors by proteomics, which will provide valuable information to assist experimental biologists in model selection.

2019-12-03 | PXD011885 | Pride

Proprioception is governed by highly diverse and versatile sensory neuron types

Project description:Proprioception is governed by highly diverse and versatile sensory neuron types

| PRJNA657004 | ENA

ENCODE H1_ES cell phenotyping study

Project description:These samples are part of the ENCODE consortium’s proposed time-limited Pilot Study for confirmation of the utility of RNA abundance measurements as a standard reference phenotyping tool. Keywords: cell type comparison For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Each batch of H1-ES cells cultured by Cellular Dynamics International for use by the ENCODE labs was processed on Affymetrix Exon 1.0 ST arrays to obtain phenotyping data.

2009-02-16 | E-GEOD-14863 | biostudies-arrayexpress

Diverse mammalian retinal ganglion cell types revealed by single cell transcriptome profiling

Project description:Diverse mammalian retinal ganglion cell types revealed by single cell transcriptome profiling

| PRJNA509760 | ENA

ENCODE Tier2 cell phenotyping study

Project description:These samples are part of the ENCODE consortium’s proposed time-limited Pilot Study for confirmation of the utility of RNA abundance measurements as a standard reference phenotyping tool. Keywords: cell type comparison For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Each of the 7 ENCODE laboratories submitted biological triplicates for at least one of the four Tier2 cell lines. These were processed on Affymetrix Exon 1.0 ST arrays to obtain phenotyping data for each cell ine.

2009-08-24 | E-GEOD-17778 | biostudies-arrayexpress

Single-Cell RNA-Seq of allogeneic and syngeneic heart grafts in mouse cardiac transplantation

Project description:we present the first comprehensive analysis of the heterogeneity in gene expression and cell types in the allogeneic and syngeneic mouse heart grafts using scRNA-seq. We identify 21 distinct cell populations by performing dimensionality reduction and unsupervised cell clustering analysis in the allogeneic and syngeneic heart grafts.

2022-03-02 | GSE151048 | GEO

Transcriptome analysis of diverse cell types infected with human cytomegalovirus [array]

Project description:Comprehensive RNA sequencing and splicing-sensitive microarray analysis of three diverse cell types infected with human cytomegalovirus (HCMV), including primary fibroblasts (HFFs), endothelial cells (ECs), and neural progenitors (NPCs) derived from embryonic stem cells. This global analysis includes both host and viral gene expression measurements, and an in-depth assessment of alternative RNA processing events. Extended comparisons were conducted through RNA sequencing analysis of human herpes simplex virus (HSV)-2 and human immunodeficiency virus type 1 (HIV-1) infections.

2016-09-17 | GSE73843 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data