Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptional profiling of pancreatic somatostatin and beta-cells from zebrafish [scRNA-seq]

ABSTRACT: Transcriptional profiling of pancreatic somatostatin and beta-cells from zebrafish [scRNA-seq]

PROVIDER: PRJNA640143 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Transcriptional profiling of pancreatic somatostatin and beta-cells from zebrafish

Project description:Transcriptional profiling of pancreatic somatostatin and beta-cells from zebrafish

| PRJNA640139 | ENA

Transcriptional profiling of pancreatic somatostatin and beta-cells from zebrafish [bulk RNA-seq]

Project description:Transcriptional profiling of pancreatic somatostatin and beta-cells from zebrafish [bulk RNA-seq]

| PRJNA640144 | ENA

ATAC sequencing of zebrafish pancreatic beta-cells

Project description:Pancreatic beta-calls are responsible for regulating the blood glucose levels via secretion of hormone insulin. To elucidate the chromatin state in zebrafish beta-cells, we performed ATAC-Sequencing.

2021-12-31 | GSE152199 | GEO

ATAC sequencing of zebrafish pancreatic beta-cells

Project description:ATAC sequencing of zebrafish pancreatic beta-cells

| PRJNA638621 | ENA

Transcriptional profiling of pancreatic somatostatin and beta-cells from zebrafish [scRNA-seq]

Project description:Pancreas contains a collection of different types of endocrine cells. Each endocrine cell secretes a specific hormone. Using reporter lines for two hormones, insulin and somatostatin1.1, we observe the presence of bi-hormonal cells in zebrafish pancreas. To characterize the cells at transcriptional level, we performed next-generation RNA-Sequencing on FACS sorted cells expressing sst1.1, ins, or both sst1.1 and ins.

2021-12-31 | GSE152695 | GEO

Single-cell RNA sequencing of zebrafish pancreatic cells during beta-cell regeneration

Project description:To better understand the underlying mechanism of beta-cell regeneration in adult zebrafish, we performed single-cell transcriptomic profiling of the pancreatic tissue (using 10X Genomics) at various stages post beta-cell ablation.

2022-06-21 | GSE166052 | GEO

RNA-Seq of wild type and somatostatin 3 CrispR/Cas9 zebrafish mutants treated with dextran sodium sulfate (DSS)

Project description:Wild type and somatostatin 3 (Sst3) gene CrispR/Cas9 mutants of the AB zebrafish strain were treated with dextran sodium sulfate (DSS) to determine the role of sst3 in the innate immune response.

2020-07-31 | E-MTAB-9018 | biostudies-arrayexpress

Phosphoproteome of mouse pancreatic beta cell

Project description:TMT-labeled phosphoproteome data of mouse pancreatic beta cell

2021-05-11 | PXD022745 | JPOST Repository

Single-cell RNA sequencing of zebrafish pancreatic cells

Project description:The pancreatic beta-cells regulate blood glucose levels by secreting the hormone insulin in response to increasing glucose levels. Recent work has identified molecular and functional heterogeneity among the beta-cell community. To ontain an unbiased picture into the molecular heterogeneity present in zebrafish pancreatic cells, we performed droplet based next-generation sequencing of individual pancreatic cells. Using unsupervised clustering, we could identify all the major cell types present in the pancreas. Moreover, we could define sub-populations within the major cell-types, demonstrating the presence of molecular heterogeneity within nominally homogenous cell-populations.

2019-04-05 | GSE123662 | GEO

Transcriptional profiling of pancreatic somatostatin and beta-cells from zebrafish [bulk RNA-seq]

2021-12-31 | GSE152696 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data