Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Double-strand GFP RNA injection reveals no off-target effect in Nasonia vitripennis

ABSTRACT: Double-strand GFP RNA injection reveals no off-target effect in Nasonia vitripennis

PROVIDER: PRJNA641891 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Double-strand GFP RNA injection reveals no off-target effect in Nasonia vitripennis

Project description:The aim of this experiment is to assess the off-target effect of RNAi in Nasonia vitripennis at transcriptome level by comparing the effect of a non-specific RNAi against GFP together with water or not injected controls.

2021-12-21 | GSE153268 | GEO

Nasonia vitripennis

Project description:Nasonia vitripennis methylome sequencing

| PRJNA232565 | ENA

Nasonia vitripennis

Project description:Nasonia vitripennis Raw sequence reads

| PRJNA355086 | ENA

Nasonia Vitripennis

Project description:Nasonia Vitripennis Raw sequence reads

| PRJNA300691 | ENA

Nasonia vitripennis x Nasonia giraulti

Project description:Nasonia vitripennis x Nasonia giraulti overview

| PRJNA323388 | ENA

Gene expression profile in the reicprocal F1 hybrids of two jewel wasp species Nasonia vitripennis and Nasonia giraulti [RNA-seq]

Project description:We quantified genome-wide total and allele-specific expression in two non-social parasitoids wasp species Nasonia vitripennis and Nasonia giraulti and their reciprocal F1 hybrids. No parent-of-origin effect in allelic expression was found for >8,000 informative genes, suggesting lack of genomic imprinting in adult Nasonia. Gene expression divergence between Nv and Ng could be attributed to both significant cis- and trans- regulatory changes during evolution.

2016-05-24 | GSE74300 | GEO

Profiling of expression level in adult female Nasonia vitripennis

Project description:The expression level in the parasitoid Nasonia vitripennis adult female samples was profiled and compared with the methylation pattern. Methylated and non-methylated genes showed markedly different patterns. The expression level was higher for methylated than non-methylated genes. non-nmethylated genes account for 99% of the genes that were not found to be expressed in the adult female RNA-seq data (FPKM < 0.1). Unlike methylated genes, the expression distribution of the non-methylated genes was bimodal with a lower expressed group and a moderately expressed group of genes, indicating that methylation status is not the only determinant of high expression in adult females. Methylated genes also have lower coefficient of variation (CV) of expression level across five developmental stages, suggesting that they are expressed more evenly across development. Profiling of expression level in adult female Nasonia vitripennis by RNA-seq

2013-08-27 | E-GEOD-43422 | biostudies-arrayexpress

Nasonia vitripennis strain:12.1

Project description:Nasonia vitripennis Ovarian Transcriptome

| PRJNA319204 | ENA

Genome-scale methylation changes induced by photoperiods in Nasonia vitripennis

Project description:Seasonal photoperiodic changes have strong impact on development in Nasonia vitripennis. Here, Using high-throughput Reduced Representation Bisulfite Sequencing (RRBS) and single-molecule-based sequencing, we generated DNA methylation maps of female wasps maintained in long vs short day. We have identified differential methylated loci that encode the photoperiodic change.

2014-09-01 | GSE44869 | GEO

Tag-seq profiling by high-throughput sequencing of Nasonia vitripennis mated and virgin females

Project description:Comparison of DeepSAGE data from mated and virgin females of Nasonia vitripennis from two time points considering head and body samples separately utilizing Illumina GA platform

2012-11-30 | E-MTAB-531 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data