Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Streptomyces hygroscopicus subsp. hygroscopicus strain:5-4

ABSTRACT: Streptomyces hygroscopicus subsp. hygroscopicus strain:5-4 Genome sequencing and assembly

PROVIDER: PRJNA665863 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Streptomyces hygroscopicus 5008 Transcriptome or Gene expression

Project description:The RNA sequencing approach was utilized to carry out a comparative transcriptome analysis between Streptomyces hygroscopicus 5008 wild-type and a genetically engineered strain. The A-factor-like cascade play an important role in the regulation of validamycin biosynthesis by Streptomyces hygroscopicus 5008, and the pleiotropic regulator AdpA-H may positively regulate the transcription of gene cluster for the biosynthesis. shbR1 and shbR3 as the A-factor receptor homolog genes, could repress the transcription of AdpA-H. By tandem deletions of these genes, the production and productivity of validamcyin was significantly enhanced. To explore the effects of the shbR1/R3 double deletion of the overall cellular metabolism, the RNA sequencing approach was utilized to carry out a comparative transcriptome analysis between wild-type and shbR1/shbR3 double mutant (genetically engineered strain).

2014-05-31 | GSE58115 | GEO

Streptomyces hygroscopicus subsp. hygroscopicus strain:NBRC 13472

Project description:Streptomyces hygroscopicus subsp. hygroscopicus NBRC 13472 genome sequencing project

| PRJDB3201 | ENA

Streptomyces hygroscopicus subsp. hygroscopicus strain:NBRC 16556

Project description:Streptomyces hygroscopicus subsp. hygroscopicus NBRC 16556 genome sequencing project

| PRJDB3202 | ENA

Streptomyces hygroscopicus 5008 Transcriptome or Gene expression

2014-05-31 | E-GEOD-58115 | biostudies-arrayexpress

Streptomyces hygroscopicus subsp. jinggangensis 5008

Project description:Streptomyces hygroscopicus subsp. jinggangensis 5008 Genome sequencing

| PRJNA81087 | ENA

Streptomyces hygroscopicus subsp. jinggangensis TL01

Project description:Streptomyces hygroscopicus subsp. jinggangensis TL01 Genome sequencing

| PRJNA169410 | ENA

Streptomyces hygroscopicus subsp. limoneus strain:KCTC 1717

Project description:Streptomyces hygroscopicus subsp. limoneus strain:KCTC 1717 Genome sequencing and assembly

| PRJNA302679 | ENA

Streptomyces hygroscopicus

Project description:Streptomyces hygroscopicus Genome sequencing and assembly

| PRJNA350243 | ENA

Streptomyces hygroscopicus

Project description:Streptomyces hygroscopicus overview

| PRJNA37181 | ENA

Streptomyces hygroscopicus strain:ATCC 21589

Project description:Streptomyces hygroscopicus genome sequencing and assembly

| PRJNA280562 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data