Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Aspergillus niger strain:DeltaxlnRDeltaaraR

ABSTRACT: Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.8.2 transcriptome

PROVIDER: PRJNA676479 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Aspergillus niger strain:DeltaxlnRDeltaaraR

Project description:Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.2.1 transcriptome

| PRJNA676475 | ENA

Aspergillus niger strain:DeltaxlnRDeltaaraR

Project description:Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.2.2 transcriptome

| PRJNA676476 | ENA

Aspergillus niger strain:DeltaxlnRDeltaaraR

Project description:Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.2.3 transcriptome

| PRJNA676477 | ENA

Aspergillus niger strain:DeltaxlnRDeltaaraR

Project description:Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.8.1 transcriptome

| PRJNA676478 | ENA

Aspergillus niger strain:DeltaxlnRDeltaaraR

Project description:Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.8.3 transcriptome

| PRJNA676480 | ENA

Aspergillus niger strain:DeltaxlnRDeltaaraR

Project description:Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.24.1 transcriptome

| PRJNA676481 | ENA

Aspergillus niger strain:DeltaxlnRDeltaaraR

Project description:Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.24.2 transcriptome

| PRJNA676482 | ENA

Aspergillus niger strain:DeltaxlnRDeltaaraR

Project description:Aspergillus niger DeltaxlnRDeltaaraR Gene Expression Profiling - 8.24.3 transcriptome

| PRJNA676483 | ENA

A tri-species Aspergillus array (niger arrays)

Project description:The full genome sequencing of the ﬁlamentous fungi Aspergillus nidulans, Aspergillus niger and Aspergillus oryzae has opened the possibilities for studying the cellular physiology of these fungi on a systemic level. As a tool to explore this, we are presenting an Aﬀymetrix GeneChip developed for transcriptome analysis of any of the three above-mentioned aspergilli. Transcriptome analysis of triplicate batch cultivations of all three aspergilli on glucose-and xylose media has been performed, and used to validate the performance of the micro array. By doing gene comparisons of all three species, and cross-analysing this with the expression data, 23 genes, including the xylose transcriptional activator XlnR, have been identiﬁed to be a conserved response across the Aspergillus sp. Promoter analysis of the upregulated genes in all three species suggest the XlnR-binding site to be 5’-GGNTAAA-3’. We are thus presenting a validated tool for transcription analysis of three Aspergillus species and a methodology for comparative transcriptomics. Keywords: Physiological response

2008-02-15 | GSE9276 | GEO

Aspergillus niger mutants: induction by various carbon sources

Project description:This SuperSeries is composed of the following subset Series: GSE37758: Aspergillus niger : Control (fructose) vs. steam-exploded sugarcane induction (SEB) GSE37760: Aspergillus niger : Control (fructose) vs. xylose + arabinose (XA) Refer to individual Series

2012-05-06 | E-GEOD-37795 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data