Project description:CRISPR screen: U2OS or U2OS p53KO cells expressing Cas9 were transduced with a whole-genome library of CRISPR sgRNAs, then treated with either DMSO or etoposide. Differential sgRNA abundances were calculated for each condition and used to determine the effect of each single gene knockout on fitness and the drug-induced death rate. RNA-Seq: U2OS or U2OS p53KO cells were cultured with either DMSO or etoposide for 48 hours, and then U2OS cells were incubated in this conditioned media for 8 hours. RNA was collected and use to observe differential expression changes between conditions.

2023-05-17 | GSE232592 | GEO

SUMO2 ChIP-seq in U2OS cells

Project description:SUMO2 ChIP-seq in U2OS cells

| PRJEB7728 | ENA

RNA-seq analysis of control and Myc-induced U2OS cells

Project description:We used RNA-seq to examine the effect of Myc activation on U2OS cells transcriptome. We also examined these effects in the presence of Torin-1, an inhibitor of mTOR We measure gene expression profiles in U2OS cells containing an inducible Myc expression vector that were induced or mock-treated in duplicates for 36 hours. In addition, we repeated the experiments in the presence of Torin-1, an inhibitor of mTOR.

2015-11-04 | E-GEOD-66789 | biostudies-arrayexpress

RNA-Seq of U2OS cells with and without IFNα2 pretreatment

Project description:RNA-Seq of U2OS cells with and without IFNα2 pretreatment

| PRJNA668283 | ENA

RNA-seq in HCT116 cell lines

Project description:RNA-seq in HCT116 cell lines

| PRJNA773655 | ENA

RNA-seq analysis of control and Myc-induced U2OS cells

Project description:We used RNA-seq to examine the effect of Myc activation on U2OS cells transcriptome. We also examined these effects in the presence of Torin-1, an inhibitor of mTOR

2015-11-04 | GSE66789 | GEO

RNA-seq in HCT116 cells with LINC01534 knockdown

Project description:To obtain a detailed view of genes and pathways regulated by LINC01534 (Long Intergenic Non-Protein Coding RNA 1534) in the HCT116 cells, we carried out global RNA-seq in HCT116 cells with LINC01534 knocked down.

2023-08-02 | GSE179624 | GEO

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