Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Novosphingobium sp. 1748 isolate:DPS 1748

ABSTRACT: Novosphingobium sp. 1748 isolate:DPS 1748 Genome sequencing

PROVIDER: PRJNA709400 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Metabolic capacities of Novosphingobium sp. HR1a in the rhizosphere

Project description:Rhizoremediation, the biotechnology of the utilization of rhizospheric microorganisms associated with plant roots for the elimination of soil contaminants, is based on the ability of microorganisms to metabolize nutrients from plant root exudates, in order to survive the stressful conditions of the rhizosphere, and thereby, to co-metabolize or even mineralize toxic environmental contaminants. Novosphingobium sp. HR1a is a bacterial strain able to degrade a wide variety of polycyclic aromatic hydrocarbons (PAHs). We have demonstrated that this bacterium is able to grow in vegetated microcosms and to eliminate phenanthrene in the presence of clover faster than in non-vegetated systems, establishing a positive interaction with clover. We have studied the molecular basis of this interaction by phenomic, metabolomic and transcriptomic analyses, demonstrating that the positive interaction between clover and Novosphingobium sp. HR1a is a result of the bacterial utilization of different carbon and nitrogen sources (such as sugars, amino acids and organic acids) released during seedling development, and the capacity of exudates to induce the PAH degradation pathway. These results are pointing out to Novosphingobium sp. HR1a as a promising strain for the bioremediation of PAH-contaminated soils.

2021-04-19 | GSE172273 | GEO

Transcriptome analysis of Novosphingobium sp. THN1 during microcystin-LR degradation under different carbon concentrations

Project description:The bacterium Novosphingobium sp. THN1 (THN1) is capable of degrading microcystin-LR (MCLR). To get an insight into genes expression during MCLR degradation and the regulation of different carbon concentrations on MCLR degradation, we performed RNA-seq of THN1 during MCLR degradation under different carbon concentrations.

2019-01-30 | GSE125827 | GEO

Microbacterium sp. 1518 isolate:DPS 1518

Project description:Microbacterium sp. 1518 isolate:DPS 1518 Genome sequencing

| PRJNA695710 | ENA

Herbaspirillum sp. 1589 isolate:DPS 1589

Project description:Herbaspirillum sp. 1589 isolate:DPS 1589 Genome sequencing

| PRJNA695711 | ENA

Pseudomonas sp. 3400 isolate:DPS 3400

Project description:Pseudomonas sp. 3400 isolate:DPS 3400 Genome sequencing

| PRJNA709229 | ENA

Phycicoccus sp. 3266 isolate:DPS 3266

Project description:Phycicoccus sp. 3266 isolate:DPS 3266 Genome sequencing