Project description:We isolated an efficient doxycycline degrading strain Chryseobacterium sp. WX1. To investigate gene expression patterns during doxycyclinedegradation by strain WX1, we conducted a comparative transcriptomic analysis using cultures of strain WX1 with and without doxycycline addition. The RNA-Seq data revealed that 90.44-96.56% of the reads mapped to the genome of Chryseobacterium sp. WX1 across all samples. Differentially expressed genes (DEGs) analysis (|log2FC| >2; p < 0.01) showed that 693 genes were significantly up-regulated and 592 genes were significantly down-regulated.

2023-09-12 | GSE242785 | GEO

Proteomic data on the biodegradation of doxycycline by Chryseobacterium sp. WX1

Project description:In this study, we isolated a potent doxycycline-degrading bacterium, Chryseobacterium sp. WX1, from environmental samples. To elucidate the molecular mechanisms underlying doxycycline degradation by strain WX1, we assessed and interpreted the proteomic profiles of Chryseobacterium sp. WX1 under conditions both with and without doxycycline exposure.

2023-09-07 | PXD045182 | Pride

Brevibacterium sediminis strain:COD27

Project description:Brevibacterium sediminis strain:COD27 Genome sequencing

| PRJNA740147 | ENA

Aquimarina sediminis strain:w01

Project description:Aquimarina sediminis Genome sequencing and assembly

| PRJNA429561 | ENA

Salinimonas sediminis strain:N102

Project description:Salinimonas sediminis strain:N102 Genome sequencing

| PRJNA486605 | ENA

Laceyella sediminis strain:RHA1

Project description:Laceyella sediminis DSM 45263 genome sequencing