Algae metagenome
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA710737 | ENA |
REPOSITORIES: ENA
Similar Datasets
Project description:Metatranscriptome of green algae associated microbial communities from Chlorella culture in University of Arizona, USA - V. chlorellavorus infection vv_d4_1
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Project description:Vampirovibrio chlorellavorus strains genome sequencing from Chlorella algae enrichment culture
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Project description:Green algae associated microbial communities from Chlorella culture in LANL, New Mexico, United States - Vampirovibrio chlorellavorus metagenome
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Project description:Enriched cells of Vampirovibrio chlorellavorus culture contaminated with Chlorella, University of Arizona, USA - Vampirovibrio chlorellavorus Vc_AZ 1_2 metagenome
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Project description:Enriched cells of Vampirovibrio chlorellavorus culture contaminated with Chlorella, University of Arizona, USA - Vampirovibrio chlorellavorus Vc_AZ 7_2 metagenome
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Project description:Enriched cells of Vampirovibrio chlorellavorus culture contaminated with Chlorella, University of Arizona, USA - Vampirovibrio chlorellavorus Vc_AZ 3_1 metagenome
| PRJNA708358 | ENA
Project description:Enriched cells of Vampirovibrio chlorellavorus culture contaminated with Chlorella, University of Arizona, USA - Vampirovibrio chlorellavorus Vc_AZ 8_2 metagenome
| PRJNA708359 | ENA
Project description:Green hydra (Hydra viridissima) harbors endosymbiotic Chlorella and have established a mutual relation. To identify the host hydra genes involved in the specific symbiotic relationship, transcriptomes of intact H. viridissima colonized with symbiotic Chlorella strain A99, aposymbiotic H.viridissima and H. viridissima artificially infected with other symbiotic Chlorella were compared by microarray analysis. The results indicated that genes involved in nutrition supply to Chlorella were upregulated in the symbiotic hydra. In addition, it was induced by supply of photosynthates from the symbiont to the host, suggesting cooperative metabolic interaction between the host and the symbiotic algae.
2018-04-01 | GSE97633 | GEO
Project description:Micro algae's are used as alternative protein source in human and animal diets. Besides micro algae contain substantial amounts of proteins they also contain a high concentration of, often unique, biological and chemical substances with potential to induce beneficial and health promoting effects in humans and animals. This study was set up to evaluate the potential of these substances to improve (intestinal) health. The effect of extracts prepared from 3 monocultures of micro algae's (Chlorella vulgaris [C], Haematococcus pluvialis [H], and Spirulina platensis [S]) and a mixed culture of micro algae's (AM; a mixture of Scenedesmus sp. and Chlorella sp. ) was studied in the presence and absence of the enterotoxigenic bacterium Escherichia coli k99 strain (ETEC, [E]) as an in vitro challenge. The E.coli-k99 strain with adhesion factor F41 (41/32) was isolated from a mastitis-infected udder. Gene expression was measured in cultured intestinal porcine epithelium cells (IPECJ2 cell line) after 2 and 6 hours incubation with C, H, and S extracts, and after 6 hours with the AM extract, using “whole genome” porcine microarrays. Gene expression profiles were analysed using functional bioinformatics programs to provide insight in the biological processes induced by micro algae extracts.
2019-03-14 | GSE113365 | GEO
Project description:Cypermethrin (CYP) is one of the most widely used pesticides in large scale for agricultural and domestic purpose and the residue often seriously affects aquatic system. Environmental pollutants induced protein changes in organisms could be detected by proteomics, leading to discovery of potential biomarkers and understanding of mode of action. While proteomics investigations of CYP stress in some animal models have been well studied, few reports about the effects of exposure to CYP on algae proteome were published. To determine CYP effect in algae, the impact of various dosages (0.001 µg/L, 0.01 µg/L and 1 µg/L) of CYP on green algae Chlorella Vulgaris for 24h and 96h were investigated by using iTRAQ quantitative proteomics technique. A total of 162 and 198 proteins were significantly altered after CYP exposure for 24h and 96h, respectively. Overview of iTRAQ results indicated that the influence of CYP on algae protein might be dosage-dependent. Functional analysis of differentially expressed proteins showed that CYP could induce protein alterations related to photosynthesis, stress responses and carbohydrates metabolism. This study provides a comprehensive view of complex mode of action of algae under CYP stress and highlights several potential biomarkers for further investigation of pesticides exposed plant and algae.
2016-03-14 | PXD003521 | Pride