Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome of Salmonella within Acanthamoeba

ABSTRACT: Transcriptome of Salmonella within Acanthamoeba

PROVIDER: PRJNA726515 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Transcriptome of Salmonella within Acanthamoeba

Project description:Here, we report global gene expression of S. enterica serovar Typhimurium within Acanthamoeba castellanii by Cappable-Seq

2021-05-01 | GSE173638 | GEO

Transcriptome analysis of Escherichia coli O157:H7 EDL933 inside Acanthamoeba using microarrays

Project description:The transcriptome of Escherichia coli K-12 has been widely studied over a variety of conditions for the past decade while such studies involving E. coli O157:H7, its pathogenic cousin, are just now being conducted. To better understand the impact of intracellular life within a ruminant and environmental protozoan on E. coli O157:H7, global transcript levels of strain EDL933 cells inside Acanthamoeba were compared to cell grown in the protozoan media (ATCC PYG712) by microarray. Nine independent RNA samples from cell from within Acanthamoeba were paired with seven independent RNA samples from control cultures for hybridization to nine two-color microarrays. For four arrays, the control RNA sample was labeled with Cy3 dye and the experimental RNA sample was labeled with Cy5 dye, the dyes were reversed for the other five arrays to overcome dye bias.

2010-12-01 | E-GEOD-16762 | biostudies-arrayexpress

Transcriptome analysis of Escherichia coli O157:H7 EDL933 inside Acanthamoeba using microarrays

2010-12-01 | GSE16762 | GEO

Acanthamoeba polyphaga

Project description:Acanthamoeba polyphaga infected with Acanthamoeba polyphaga Mimivirus Transcriptome

| PRJNA720295 | ENA

Transcription profiling of Acanthamoeba polyphaga mimivirus infecting Acanthamoeba castellanii for different lengths of time

Project description:A culture of Acanthamoeba castellanii cells was infected with mimivirus. At specified times after infection, infected cells aliquots were subjected to total RNA extraction. Cy3 labeled cDNA was hybridized on custom designed Agilent oligonucleotide tiling microarrays covering both strands of the mimivirus genome.

2010-03-18 | E-MTAB-187 | biostudies-arrayexpress

Acanthamoeba lenticulata

Project description:Acanthamoeba lenticulata overview

| PRJNA388714 | ENA

Acanthamoeba castellanii

Project description:RNAseq data from Acanthamoeba castellanii

| PRJNA794325 | ENA

Acanthamoeba castellanii

Project description:Acanthamoeba castellanii Raw sequence reads

| PRJNA422304 | ENA

Acanthamoeba castellanii strain:Neff

Project description:Acanthamoeba castellanii