Project description:Cichlids fishes exhibit extensive phenotypic diversification and speciation. In this study we integrate transcriptomic and proteomic signatures from two cichlids species, identify novel open reading frames (nORFs) and perform evolutionary analysis on these nORF regions. We embark comparative transrcriptomics and proteogenomic analysis of two metabolically active tissues, the testes and liver, of two cichlid species Oreochromis niloticus (Nile tilapia, ON) and Pundamilia nyererei (Makobe Island, PN). Our results suggest that the time scale of speciation of the two species can be better explained by the evolutionary divergence of these nORF genomic regions.

2021-05-17 | GSE150744 | GEO

Project description:WTCCC2 project Schizophrenia (SP) samples

| EGAD00010000262 | EGA

Project description:Pundamilia linkage map sequence data of F2 cross

| PRJNA439430 | ENA

Pundamilia cichlids

Project description:Demographic modeling with whole genome data reveals parallel origin of similar Pundamilia cichlid species after hybridization

| PRJNA339828 | ENA

Astatotilapia calliptera x Protomelas taeniolatus

Project description:F2 hybrid cross between Astatotilapia calliptera x Protomelas taeniolatus raw sequence reads

| PRJNA612298 | ENA