Genomics

Dataset Information

118

Ipomoea batatas


ABSTRACT: De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and SSR Marker identification in sweet potato (Ipomoea batatas)

ORGANISM(S): Ipomoea batatas  

PROVIDER: PRJNA79717 | ENA |

REPOSITORIES: ENA

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Publications

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweet potato (Ipomoea batatas).

Wang Zhangying Z   Fang Boping B   Chen Jingyi J   Zhang Xiongjian X   Luo Zhongxia Z   Huang Lifei L   Chen Xinliang X   Li Yujun Y  

BMC genomics 20101224


BACKGROUND: The tuberous root of sweet potato is an important agricultural and biological organ. There are not sufficient transcriptomic and genomic data in public databases for understanding of the molecular mechanism underlying the tuberous root formation and development. Thus, high throughput transcriptome sequencing is needed to generate enormous transcript sequences from sweet potato root for gene discovery and molecular marker development. RESULTS: In this study, more than 59 million seque  ...[more]

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