Genomics

Dataset Information

0

Thalassiosira pseudonana CCMP1335


ABSTRACT: Characterization of small RNA transcriptome in the diatom, Thalassiosira pseudonana

ORGANISM(S): Thalassiosira pseudonana CCMP1335  

PROVIDER: PRJNA79863 | ENA |

REPOSITORIES: ENA

Dataset's files

Source:
Action DRS
SRR077494.fastq.gz Fastqsanger.gz
SRR077760.fastq.gz Fastqsanger.gz
SRR077761.fastq.gz Fastqsanger.gz
SRR081270.fastq.gz Fastqsanger.gz
SRR081561.fastq.gz Fastqsanger.gz
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Publications

Characterization of the small RNA transcriptome of the diatom, Thalassiosira pseudonana.

Norden-Krichmar Trina M TM   Allen Andrew E AE   Gaasterland Terry T   Hildebrand Mark M  

PloS one 20110812 8


This study presents the first characterization of endogenous small RNAs in a diatom, Thalassiosira pseudonana. Small RNAs act as transcriptional and translational regulators, controlling specific target genes involved in various cellular functions. Diatoms are unicellular photosynthetic organisms that play major roles in environmental processes, such as food webs and global carbon fixation. Small RNA cDNA libraries were constructed for exponentially growing T. pseudonana, and then subjected to h  ...[more]

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