Project description:Microbiome site model is a Named Entity Recognition (NER) model that identifies and annotates the site of microbiome samples in texts. This is the final model version used to annotate metagenomics publications in Europe PMC and enrich metagenomics studies in MGnify with site metadata from literature. For more information, please refer to the following blogs: http://blog.europepmc.org/2020/11/europe-pmc-publications-metagenomics-annotations.html https://www.ebi.ac.uk/about/news/service-news/enriched-metadata-fields-mgnify-based-text-mining-associated-publications

2023-09-15 | MODEL2202170013 | BioModels

Mangrove soil metagenome

Project description:Metagenomic study of mangrove soil

| PRJNA448557 | ENA

soil microbiome

Project description:Oklahoma warming site soil microbiome metagenomic sequence

| PRJNA533082 | ENA

Reconditioning Degraded Mine Site Soils With Exogenous Soil Microbes: Plant Fitness and Soil Microbiome Outcomes.

Project description: Not available

| S-EPMC6636552 | biostudies-literature

Soil microbiome of a site contaminated with heavy metals

Project description:Soil microbiome of a site contaminated with heavy metals

| PRJNA742242 | ENA

Nassar2022 - Microbiome body-site NER model

Project description:body-site model is a Named Entity Recognition (NER) model that identifies and annotates the body-site of microbiome samples in texts. This is the final model version used to annotate metagenomics publications in Europe PMC and enrich metagenomics studies in MGnify with body-site metadata from literature. For more information, please refer to the following blogs: http://blog.europepmc.org/2020/11/europe-pmc-publications-metagenomics-annotations.html https://www.ebi.ac.uk/about/news/service-news/enriched-metadata-fields-mgnify-based-text-mining-associated-publications

2023-09-13 | MODEL2202160002 | BioModels

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