Proteomics

Dataset Information

79

The redoxproteome: protein nitrosylation and glutathionylation as regulatory mechanisms during plant defense responses to pathogens


ABSTRACT: The present work is directed at studying changes at the proteome level in Arabidopsis thaliana leaves in response to Pseudomonas syringae virulent (Pst) and avirulent (Pst avrRpt2) strains. Arabidopsis leaves were sampled from challenged plants at 4, 8 and 24 hours post inoculation. Proteins were TCA-acetone-phenol extracted and subjected to 2-DE (5-8 pH range) and MS/MS (MALDI-TOF-TOF) analysis. Out of 800 matched spots on each of the 36 gels analysed, 147 spots were either absent in at least one of the conditions studied (time or treatments; qualitative variable spots) or differentially accumulated between time and treatments (quantitative variable spots). Out of the 24 proteins successfully identified over TAIR10 database, 23 have not been reported previously in similar proteomics studies of the Arabidopsis thaliana-Pseudomonas syringae interaction. The exhaustive statistical analysis performed, including principal component and heat map, showed that 24 hours post inoculation can clearly discriminate the challenged plants from the control. The protein change occurred early (4 hours post inoculation) following the virulent pathogen infection, whereas the change occurred later (24 hours post inoculation) following the avirulent pathogen inoculation. Concerning the variable proteins, three behavioural groups can be observed: group 1 (common protein changes in response to virulent and avirulent pathogen infection), group 2 (protein changes in response to virulent pathogen infection) and group 3 (protein changes in response to avirulent pathogen infection). Differential identified proteins following the pathogen infection belonged to different groups including those of oxidative stress defence, enzymes of metabolic pathways and molecular chaperones.

INSTRUMENT(S): instrument model, 4700 Proteomics Analyzer

ORGANISM(S): Arabidopsis thaliana  

TISSUE(S): Not Available

DISEASE(S): Not Available

SUBMITTER: Besma Sghaier-Hammami  

PROVIDER: PRD000569 | Pride | 2011-10-19

REPOSITORIES: Pride

Similar Datasets

| GSE88798 | GEO
2013-03-06 | E-MTAB-4450 | ArrayExpress
2011-06-01 | E-MTAB-542 | ArrayExpress
2011-08-30 | E-GEOD-31761 | ArrayExpress
| GSE95394 | GEO
2005-01-01 | E-MEXP-696 | ArrayExpress
2014-07-28 | E-MEXP-696 | ExpressionAtlas
2012-06-29 | E-GEOD-38999 | ArrayExpress
| GSE110100 | GEO
2011-11-28 | E-GEOD-29740 | ArrayExpress