Dataset Information

Neospora Caninum whole proteome study

ABSTRACT: MS/MS dataset for proteogenomics study of Neospora Caninum. The dataset was searched against the official v10 gene model from ToxoDB, and the alternate panels of proteins predicted from RNA-SEQ evidences.

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Neospora Caninum (strain Liverpool)

SUBMITTER: Ritesh Krishna

LAB HEAD: Ritesh Krishna

PROVIDER: PXD000298 | Pride | 2015-02-09

REPOSITORIES: Pride

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Publications

A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum.

Krishna Ritesh R Xia Dong D Sanderson Sanya S Shanmugasundram Achchuthan A Vermont Sarah S Bernal Axel A Daniel-Naguib Gianluca G Ghali Fawaz F Brunk Brian P BP Roos David S DS Wastling Jonathan M JM Jones Andrew R AR

Proteomics 20150515 15

Proteomics data can supplement genome annotation efforts, for example being used to confirm gene models or correct gene annotation errors. Here, we present a large-scale proteogenomics study of two important apicomplexan pathogens: Toxoplasma gondii and Neospora caninum. We queried proteomics data against a panel of official and alternate gene models generated directly from RNASeq data, using several newly generated and some previously published MS datasets for this meta-analysis. We identified ...[more]

PMID: 25867681

Dataset Information

Neospora Caninum whole proteome study

Publications

A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum.

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