Dataset Information

Neospora Caninum whole proteome study

ABSTRACT: MS/MS dataset for proteogenomics study of Neospora Caninum. The dataset was searched against the official v10 gene model from ToxoDB, and the alternate panels of proteins predicted from RNA-SEQ evidences.

INSTRUMENT(S):

ORGANISM(S): Neospora Caninum (strain Liverpool)

SUBMITTER: Ritesh Krishna

LAB HEAD: Ritesh Krishna

PROVIDER: PXD000298 | Pride | 2015-02-09

REPOSITORIES: Pride

ACCESS DATA

Dataset's files

Source:

Items per page:

1 - 5 of 41

Publications

A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum.

Krishna Ritesh R Xia Dong D Sanderson Sanya S Shanmugasundram Achchuthan A Vermont Sarah S Bernal Axel A Daniel-Naguib Gianluca G Ghali Fawaz F Brunk Brian P BP Roos David S DS Wastling Jonathan M JM Jones Andrew R AR

Proteomics 20150515 15

Proteomics data can supplement genome annotation efforts, for example being used to confirm gene models or correct gene annotation errors. Here, we present a large-scale proteogenomics study of two important apicomplexan pathogens: Toxoplasma gondii and Neospora caninum. We queried proteomics data against a panel of official and alternate gene models generated directly from RNASeq data, using several newly generated and some previously published MS datasets for this meta-analysis. We identified ...[more]

PMID: 25867681

			Action	DRS
	1-ORB-2.raw	Raw
	11-ORB-2.raw	Raw
	2-ORB-2.raw	Raw
	3-ORB-2.raw	Raw
	4-ORB-2.raw	Raw

Dataset Information

Neospora Caninum whole proteome study

Dataset's files

Publications

A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum.

OmicsDI is part of the ELIXIR infrastructure

Tweets