Proteomics

Dataset Information

Proteomic analysis of outer membrane vesicles from the probiotic strain Escherichia coli Nissle 1917


ABSTRACT: Escherichia coli Nissle 1917 (EcN) is a probiotic used for treatment of intestinal disorders. EcN improves gastrointestinal homeostasis and microbiota balance; however little is known about how this probiotic delivers effector molecules to the host. Outer membrane vesicles (OMVs) are constitutively produced by gram-negative bacteria and have a relevant role in bacteria-host interactions. Here we performed proteomic analysis of EcN OMVs. Using 1D SDSD-PAGE and highly sensitive LC-MS/MS analysis we identified 192 EcN vesicular proteins with high confidence in three independent experiments. Of these proteins, 18 were encoded by strain-linked genes and 57 were common to pathogen-derived OMVs. These proteins may contribute to the ability of this probiotic to colonize the human gut as they fulfil functions related to adhesion to host tissues, immune modulation or bacterial survival in host niches. This study describes the first global OMV proteome of a probiotic strain and provides evidence that probiotic-derived OMVs contain proteins that can target these vesicles to the host and mediate their beneficial effects on intestinal function.

INSTRUMENT(S):

ORGANISM(S): Escherichia Coli Nissle 1917

SUBMITTER: Eliandre de Oliveira  

LAB HEAD: Eliandre de Oliveira

PROVIDER: PXD000367 | Pride | 2013-12-19

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
PXD000367_community_annotated.sdrf.tsv Tabular
exp1_001.raw Raw
exp1_001.raw.mgf Mgf
exp1_001.xml Xml
exp1_0010.raw Raw
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