Proteomics

Dataset Information

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Geodermatophilus obscurus DSM43160 proteomics

ABSTRACT: This project contributes to the proteomic comparison of different bacteria. A whole proteome catalogue was obtained for Geodermatophilus obscurus DSM43160 grown in standard conditions.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Geodermatophilus Obscurus (strain Atcc 25078 / Dsm 43160 / Jcm 3152 / G-20)

SUBMITTER: Jean ARMENGAUD  

LAB HEAD: Jean Armengaud

PROVIDER: PXD001520 | Pride | 2015-08-03

REPOSITORIES: Pride

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Publications

Stone-dwelling actinobacteria Blastococcus saxobsidens, Modestobacter marinus and Geodermatophilus obscurus proteogenomes.

Sghaier Haïtham H   Hezbri Karima K   Ghodhbane-Gtari Faten F   Pujic Petar P   Sen Arnab A   Daffonchio Daniele D   Boudabous Abdellatif A   Tisa Louis S LS   Klenk Hans-Peter HP   Armengaud Jean J   Normand Philippe P   Gtari Maher M  

The ISME journal 20150630 1

The Geodermatophilaceae are unique model systems to study the ability to thrive on or within stones and their proteogenomes (referring to the whole protein arsenal encoded by the genome) could provide important insight into their adaptation mechanisms. Here we report the detailed comparative genome analysis of Blastococcus saxobsidens (Bs), Modestobacter marinus (Mm) and Geodermatophilus obscurus (Go) isolated respectively from the interior and the surface of calcarenite stones and from desert s  ...[more]

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