Proteomics

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Nuclear proteomics reavels the role of protein synthesis and chromatin in root tips of soybean under initial flooding stress

ABSTRACT: Flooding has a severe negative effect on cultivation in the early stage of soybean growth. To understand the mechanism in early-stage soybean responding to initial flooding stress, nuclear proteomic technique was used.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Glycine Max

TISSUE(S): Plant Cell, Primary Root

DISEASE(S): Wounds And Injuries

SUBMITTER: xiaojian Yin  

LAB HEAD: Setsuko Komatsu

PROVIDER: PXD002429 | Pride | 2017-04-03

REPOSITORIES: Pride

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Publications

Nuclear Proteomics Reveals the Role of Protein Synthesis and Chromatin Structure in Root Tip of Soybean during the Initial Stage of Flooding Stress.

Yin Xiaojian X   Komatsu Setsuko S  

Journal of proteome research 20160623 7

To identify the upstream events controlling the regulation of flooding-responsive proteins in soybean, proteomic analysis of nuclear proteins in root tip was performed. By using nuclear fractions, which were highly enriched, a total of 365 nuclear proteins were changed in soybean root tip at initial stage of flooding stress. Four exon-junction complex-related proteins and NOP1/NOP56, which function in upstream of 60S preribosome biogenesis, were decreased in flooded soybean. Furthermore, proteom  ...[more]

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