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HEK293 searched with UniProt Human and ComPIL

ABSTRACT: HEK293 proteome searched with UniProt Human and ComPIL

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Early Embryonic Cell, Kidney

SUBMITTER: Greg Stupp

LAB HEAD: Dennis Wolan

PROVIDER: PXD003896 | Pride | 2016-05-25

REPOSITORIES: Pride

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A comprehensive and scalable database search system for metaproteomics.

Chatterjee Sandip S Stupp Gregory S GS Park Sung Kyu Robin SK Ducom Jean-Christophe JC Yates John R JR Su Andrew I AI Wolan Dennis W DW

BMC genomics 20160816 1

<h4>Background</h4>Mass spectrometry-based shotgun proteomics experiments rely on accurate matching of experimental spectra against a database of protein sequences. Existing computational analysis methods are limited in the size of their sequence databases, which severely restricts the proteomic sequencing depth and functional analysis of highly complex samples. The growing amount of public high-throughput sequencing data will only exacerbate this problem. We designed a broadly applicable metapr ...[more]

PMID: 27528457

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