Name: Angelo soil proteomics - Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone
Keywords: Soil proteomics

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Angelo soil proteomics - Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone

ABSTRACT: integration of metagenomics, metaproteomics, and metabolomics to study soil microbial community.

OTHER RELATED OMICS DATASETS IN: PRJNA297196

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Metagenomes

SUBMITTER: Zhou Li

LAB HEAD: Chongle Pan

PROVIDER: PXD004965 | Pride | 2016-12-23

REPOSITORIES: Pride

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Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone.

Butterfield Cristina N CN Li Zhou Z Andeer Peter F PF Spaulding Susan S Thomas Brian C BC Singh Andrea A Hettich Robert L RL Suttle Kenwyn B KB Probst Alexander J AJ Tringe Susannah G SG Northen Trent T Pan Chongle C Banfield Jillian F JF

PeerJ 20161108

Annually, half of all plant-derived carbon is added to soil where it is microbially respired to CO<sub>2</sub>. However, understanding of the microbiology of this process is limited because most culture-independent methods cannot link metabolic processes to the organisms present, and this link to causative agents is necessary to predict the results of perturbations on the system. We collected soil samples at two sub-root depths (10-20 cm and 30-40 cm) before and after a rainfall-driven nutrient ...[more]

PMID: 27843720

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