Proteomics

Dataset Information

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2014 Panama soil proteomics - Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil

ABSTRACT: integrating metagenomics and metaproteomics to study microbial communities that have undergone long-term P addition experiment

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Metagenomes

SUBMITTER: Zhou Li  

LAB HEAD: Chongle Pan

PROVIDER: PXD005910 | Pride | 2018-01-08

REPOSITORIES: Pride

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Publications

Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil.

Yao Qiuming Q   Li Zhou Z   Song Yang Y   Wright S Joseph SJ   Guo Xuan X   Tringe Susannah G SG   Tfaily Malak M MM   Paša-Tolić Ljiljana L   Hazen Terry C TC   Turner Benjamin L BL   Mayes Melanie A MA   Pan Chongle C  

Nature ecology & evolution 20180122 3

Phosphorus is a scarce nutrient in many tropical ecosystems, yet how soil microbial communities cope with growth-limiting phosphorus deficiency at the gene and protein levels remains unknown. Here, we report a metagenomic and metaproteomic comparison of microbial communities in phosphorus-deficient and phosphorus-rich soils in a 17-year fertilization experiment in a tropical forest. The large-scale proteogenomics analyses provided extensive coverage of many microbial functions and taxa in the co  ...[more]

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