Proteomics,Multiomics

Dataset Information

45

Mycobacterium tuberculosis under nitric oxide stress


ABSTRACT: To study the entire transcriptional and translational M. tuberculosis response from initial survival to eventual escape from nitric oxide (NO) stress, we exposed exponentially growing M. tuberculosis to 1 mM diethylenetriamine/nitric oxide (DETA/NO) and followed the adaptive response over 48 hours. Samples were obtained from two independent experiments performed in triplicate and we sampled aliquots for transcriptome profiling by RNA sequencing at 20 min, 2 h and 24 h and for mass spectrometry-based shotgun proteomics at 20 min, 40 min, 1 h, 2 h, 4 h, 8 h, 12 h, 24 h and 48 h post NO exposure.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Mycobacterium tuberculosis H37Rv  

TISSUE(S): Tissue Not Applicable To Dataset

DISEASE(S): Not Available

SUBMITTER: Olga Schubert  

LAB HEAD: Ruedi Aebersold

PROVIDER: PXD006039 | Pride | 2017-08-17

REPOSITORIES: Pride

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Publications

Delayed effects of transcriptional responses in Mycobacterium tuberculosis exposed to nitric oxide suggest other mechanisms involved in survival.

Cortes Teresa T   Schubert Olga T OT   Banaei-Esfahani Amir A   Collins Ben C BC   Aebersold Ruedi R   Young Douglas B DB  

Scientific reports 20170815 1


Mycobacterium tuberculosis has succeeded as a human pathogen for tens of thousands of years thanks to its ability to resist and adapt to the adverse conditions it encounters upon infection. Bacterial adaptation to stress is commonly viewed in the context of transcriptional regulation, with the implicit expectation that an initial transcriptomic response is tightly coupled to an ensuing proteomic response. However, after challenging M. tuberculosis with nitric oxide we found that the rapid transc  ...[more]

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