PROCAL: A set of 40 peptide standards for retention time indexing, column performance monitoring and collision energy calibration

ABSTRACT: We describe PROCAL (ProteomeTools Standard), a set of 40 synthetic peptides that span the entire hydrophobicity range of tryptic digests, enabling not only accurate determination of retention time indices but also monitoring of chromatographic separation performance over time. The fragmentation characteristics of the peptides can also be used to calibrate and compare collision energies between mass spectrometers. The sequences of all selected peptides do not occur in any natural protein, thus eliminating the need for stable isotope labeling and allowing straightforward integration into standard peptide identification strategies employing database searching or spectral library matching.

INSTRUMENT(S):

ORGANISM(S): Artificial Sequences

SUBMITTER: Daniel Zolg  

LAB HEAD: Bernhard Kuster

PROVIDER: PXD006832 | Pride | 2017-09-07

REPOSITORIES: Pride