Proteomics

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HDL proteome across 93 mouse strains


ABSTRACT: High-density lipoproteins (HDL) are nanoparticles with >80 associated proteins, phospholipids, cholesterol and cholesteryl esters. We have identified and quantified the ultracentrifugation isolated HDL proteome across 93 strains of mice, a diverse inbred strains of mice, Hybrid Mouse Diversity Panel (HMDP).

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Pogona vitticeps   Cupriavidus pinatubonensis JMP134   Mahonia   Toxoplasma gondii RH   Sciuridae   Salmonella enterica subsp. enterica serovar Muenchen   Bacillus pumilus   Epstein-barr virus strain p3hr-1   Catalpa fargesii   Carassius carassius   Selenomonas sputigena ATCC 35185   Lacticaseibacillus casei str. Zhang   Aggregatibacter actinomycetemcomitans D7S-1   Bubalus bubalis   Mus musculus musculus x Mus musculus castaneus   Cavia porcellus   Burkholderia cenocepacia J2315   Mycoplasma hyopneumoniae 232   Vairimorpha necatrix   Rhizoctonia solani AG-1   Modiolus kurilensis   Mycoplasma hyopneumoniae 7448   Salmo trutta fario   Photobacterium profundum SS9   Medicago sativa subsp. x varia   Leptospira borgpetersenii serovar Hardjo   Lobomonas rostrata   synthetic construct   Tetropium castaneum   Paramoeba perurans   Felis catus   Prochlorococcus marinus str. MIT 9312   Planoprotostelium fungivorum   Dermacentor reticulatus   Botrytis cinerea T4   Halobacterium salinarum   Aspergillus flavus var. flavus   Chlamydia trachomatis 434/Bu   Halorubrum lacusprofundi ATCC 49239   Synechococcus sp. PCC 7002   Cynomolgus macaque cytomegalovirus strain Mauritius   Euprymna scolopes   Alligator mississippiensis   Halohasta litchfieldiae   Mayaro virus (strain Brazil)   Streptococcus oralis   Porphyromonas gingivalis   Gallus gallus   Leptospermum scoparium   Ornithodoros erraticus   Roseburia inulinivorans DSM 16841   Emiliania huxleyi   Emiliania huxleyi CCMP371   Mycobacterium tuberculosis GM 1503   Agrobacterium fabrum str. C58   Plasmodium falciparum D10   Lepeophtheirus salmonis   Mycobacterium tuberculosis variant bovis BCG str. Moreau RDJ   Nitrosomonas ureae   Equus sp.   Tropilaelaps mercedesae   Oryza longistaminata   Boiga irregularis   Apis mellifera   Castor   Klebsiella pneumoniae JH1   Thermothelomyces thermophilus ATCC 42464   Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   Bothrops jararaca   Scolopendra viridis   Sulfurimonas denitrificans   Lolium perenne subsp. perenne   Acinetobacter sp.   Hydra vulgaris   Viola odorata   Persicaria minor   Nitrospinae   Chaetoceros sp.   Hepacivirus C   Candidatus Kentron sp. H   Moniliella spathulata   Porphyromonas gingivalis ATCC 33277   Shewanella baltica   Varroa destructor   Bacillus thuringiensis serovar berliner ATCC 10792   Legionella pneumophila   Dokdonia sp. MED134   Lactobacillus acidophilus   Clostridioides difficile 630   Arvicola   Acinetobacter nosocomialis   Orycteropus afer   Crotalus horridus   Streptomyces griseorubens   Acinetobacter baumannii   Aspergillus oryzae var. oryzae   Ictalurid herpesvirus 1   Cupiennius salei   Penaeus vannamei   Rehmannia glutinosa   Apis mellifera ligustica   Saccharina japonica   Nemopilema nomurai   Synechococcus sp. YX04-3   Trichoderma reesei QM6a   Aspergillus aff. niger A2   Candidatus Midichloriaceae   Helicoverpa armigera   Centruroides vittatus   Ipomoea batatas   Lactobacillus sp. Y10   Blautia obeum   Chlorobaculum tepidum   Dichocoenia stokesii   sludge granule bacterium 1   Streptococcus suis   Candida albicans SC5314   Glycine max   Rhipicephalus microplus   Agrobacterium tumefaciens   Fraxinus mandshurica   Vitis riparia   HIV-1 vector pNL4-3   Stenotrophomonas rhizophila   Saccharomyces cerevisiae   Pasteurella multocida subsp. multocida str. Pm70   Lactiplantibacillus plantarum WCFS1   Eulimnogammarus vittatus   Mentha spicata   Streptomyces scabiei 87.22   Boehmeria nivea   Mycobacterium tuberculosis SP1   Podospora anserina S mat+   Botrytis cinerea B05.10   Bertholletia excelsa   Salmonella enterica subsp. enterica serovar Cerro   Pongo sp.   Hippophae rhamnoides subsp. mongolica   Citrus hybrid cultivar   Anaerococcus hydrogenalis DSM 7454   Lineus longissimus   Human adenovirus 5   Alternaria alternata   Lecanicillium fungicola var. fungicola   Scylla paramamosain   Simulium damnosum s.l. Me1   Musa acuminata x Musa textilis   Alces alces   Actinoplanes sp. SE50/110   Mesorhizobium loti   Pachysolen tannophilus NRRL Y-2460   Actinidia deliciosa   Ictidomys tridecemlineatus arenicola   Prorocentrum donghaiense   Apium graveolens   Ensifer adhaerens   Cervus elaphus elaphus   Echinococcus granulosus   Marmota monax   Sterolibacterium denitrificans   Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   Streptococcus mutans 19   SARS coronavirus WHU   Equus caballus   Pseudoliparis swirei   Plasmodium falciparum UGK 730.2   Prochlorococcus marinus str. MIT 9313   Syntrophomonas wolfei subsp. wolfei str. Goettingen G311   Dracocephalum grandiflorum   [Candida] glabrata CBS 138   Faecalibacterium prausnitzii SL3/3   Tuber magnatum   Francisella philomiragia   Caprinae   Trichoderma cf. viride DIS 217I   Cylindrospermopsis raciborskii CS-509   Cannabis   Helicobacter pylori H13-1   Geobacter sulfurreducens PCA   Candidatus Pelagibacter sp.   Pseudomonas stutzeri   Xanthomonas campestris pv. campestris str. B100   Pseudomonas pseudoalcaligenes   Ustilago maydis   Paucilactobacillus suebicus   Fusarium graminearum PH-1   Amphiporus lactifloreus   Capsicum chinense x Capsicum frutescens   Chryseobacterium indologenes   Oophaga sylvatica   Bacteroides fragilis   Austrolebias   Tilletia controversa   Schistosoma mansoni   Proteus mirabilis HI4320   Giardia lamblia P15   Tuber indicum   Ruminiclostridium papyrosolvens DSM 2782   Xanthomonas campestris pv. vesicatoria str. 85-10   Malassezia globosa   Cafeteria roenbergensis   Human herpesvirus 8 strain GK18   Tetrastichus   Manica rubida   Vulpes lagopus   Lactococcus cremoris   Helicobacter hepaticus   Ebolavirus   Salmonella phage SPN3US   Komagataella pastoris DSMZ 70382   Rubus chingii var. suavissimus   Legionella pneumophila subsp. pneumophila str. Philadelphia 1   Anopheles gambiae   Termitomyces sp.   Paenibacillus amylolyticus   Herpesvirales   Bifidobacterium kashiwanohense PV20-2   Lactiplantibacillus plantarum JDM1   Plasmodium falciparum Palo Alto/Uganda   Petunia   Marseillevirus   Staphylococcus aureus subsp. aureus USA300   Candidatus Pseudothioglobus singularis PS1   Lactococcus phage   Dentex dentex   Zymomonas mobilis   Tursiops truncatus   Neptuniibacter caesariensis   Crustacea   Yersinia pestis   Millerozyma acaciae   Vicia faba var. faba   Juglans regia   Quercus robur   Enhydra lutris nereis   Leishmania chagasi   Zygaena filipendulae   Candidatus Profftella armatura   Bacillus cereus ATCC 10987   Elymus sibiricus   Meles meles   Carnobacterium divergens   Conus geographus   Trametes versicolor   Sus scrofa   Heligmosomoides polygyrus bakeri   Eubacterium limosum   Human herpesvirus 2 strain 186   Arachis hypogaea   Phaseolus vulgaris   Hypoxis hemerocallidea   Aspergillus nidulans   Salmonella enterica subsp. enterica serovar Typhimurium str. SDT1291   Mycobacterium avium subsp. paratuberculosis K-10   Thermococcus eurythermalis   marine metagenome   Pogostemon cablin   Plasmodium coatneyi   Homo sapiens/Mus musculus xenograft   Methanosarcinales   Fungi   SARS coronavirus GD322   Norovirus Hu/GII.4/MI001/2011/USA   Lolium perenne   Macaca nemestrina   Clostridium ljungdahlii DSM 13528   Myxococcus xanthus DK 1622   Tetrahymena thermophila   soil bacterium TS1114R   Trichoderma reesei QM9414   Paenibacillus pabuli   Calloselasma rhodostoma   Vaccinia virus Western Reserve   Streptomyces venezuelae   Methanohalophilus   Musa acuminata subsp. malaccensis   Phoenix dactylifera   Canis lupus familiaris   Cervus nippon nippon   Triatoma dimidiata   Nicotiana tabacum   Spironucleus salmonicida   Haemophilus haemolyticus   Bos grunniens   Candidatus Endoriftia persephone   Nezara viridula   Mycobacterium tuberculosis variant bovis BCG   Acanthamoeba castellanii   Nicotiana alata   Aeromonas hydrophila NJ-35   Actinomycetospora chiangmaiensis DSM 45062   Echinococcus ortleppi   Podospora   Algoriphagus marincola HL-49   Streptococcus pneumoniae R6   Methylocystis sp. SC2   Anguilla anguilla   Hymenolepis microstoma   Lithobius forficatus   Varanus komodoensis   Pseudomonas phage EL   Fusarium culmorum   environmental samples   Vibrio parahaemolyticus   Dorea longicatena DSM 13814   Nostoc flagelliforme   Saccharomyces cerevisiae BY4741   Hermarchus sp. HER2   Acanthamoeba polyphaga   Mus musculus x Rattus norvegicus   Mycolicibacterium smegmatis MC2 155   Ursus arctos arctos   Francisella orientalis FNO12   Cutibacterium granulosum DSM 20700   Serpentes   Merluccius bilinearis   Klebsiella pneumoniae LCT-KP289   Malaclemys terrapin   Neisseria meningitidis FAM18   Porphyromonas gingivalis W83   Eudiplozoon nipponicum   Candida dubliniensis   Tamias striatus   Toxoplasma gondii ME49   Salmonella enterica subsp. enterica serovar Newport   Carya cathayensis   Chelodina longicollis   Schizosaccharomyces pombe 972h-   Blumeria hordei DH14   Trypanosoma cruzi strain Esmeraldo   Selaginella moellendorffii   Alternaria brassicae   Mucidula mucida   Pachycladon exile   Vibrio parahaemolyticus RIMD 2210633   Gasterosteus aculeatus   Clematis chinensis   Naja haje   fungal sp. 5OL6-6PL1   Streptococcus mutans serotype C   Leishmania braziliensis MHOM/BR/75/M2904   Leishmania donovani Ld 2001   Andrias davidianus   Montipora capitata   Drosophila virilis   Synechococcus elongatus   Bothrops insularis   Nephotettix cincticeps   Ovis aries   rhizosphere soil bacteria ensemble   Eucalyptus globulus   Dehalobacter restrictus   Olavius algarvensis   Pygoscelis adeliae   Cuon alpinus   Mycobacterium tuberculosis variant bovis str. Ravenel   Aspergillus fumigatus   Serratia marcescens subsp. marcescens ATCC 13880   Blastocystis   Cynodon dactylon   Murine hepatitis virus strain A59   Chara australis   Macrostomum lignano   Naegleria gruberi   Bordetella parapertussis 12822   Salmonella enterica subsp. enterica serovar Typhimurium str. 14028s Wu   Rhizobium sp. Root491   Meandrina meandrites   Prochlorococcus marinus subsp. pastoris str. CCMP1986   Plasmodium berghei ANKA   Didelphis virginiana   Lolium multiflorum   Lepus europaeus   Shigella sonnei 53G   Opsanus beta   Conus amadis   Pomacea canaliculata   Paracoccidioides brasiliensis Pb18   Tuber aestivum   environmental samples   Acipenser   Neospora caninum   Faustovirus   Human coronavirus HKU1 (isolate N1)   Aspergillus tubingensis   Tubastraea coccinea   Campylobacter jejuni   Arcobacter   Bacillus cereus F837/76   Myotis ricketti   Candidatus Thioglobus autotrophicus   Candida dubliniensis CD36   Hypotermes   Metallosphaera   West Nile virus   Mesomycoplasma hyopneumoniae   Stenotrophomonas bentonitica   Beta vulgaris subsp. vulgaris   Ustilaginoidea virens   Phaeobacter sp. MED193   Malus baccata   Desmognathus ocoee   Tepidanaerobacter acetatoxydans   Bacillus subtilis   Strix varia   Chromatiales bacterium OalgGamma1   Pyrodictium delaneyi   Sturnus vulgaris   Mycobacterium tuberculosis H37Rv_2009   Photobacterium carnosum   Carassius gibelio   Listeria monocytogenes HCC23   Aspergillus niger ATCC 13496   Geobacter sulfurreducens   mixed culture metagenome   Zoanthus sp.   Mrakia psychrophila   Strawberry leafy fruit phytoplasma   Streptococcus agalactiae FSL S3-026   Betula pendula   Serpula lacrymans   Clostridioides difficile ATCC 43255   Beauveria bassiana   Leishmania guyanensis species complex   Stylophora pistillata   Bitis arietans   Neisseria gonorrhoeae FA 1090   Durusdinium trenchii   Candida parapsilosis CDC317   Staphylococcus epidermidis RP62A   Laodelphax striatellus   Oryzias latipes   Lagomorpha   Lactobacillus johnsonii   Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14   Cleome angustifolia   Sulfobacillus thermosulfidooxidans   Mus   Crotalus durissus terrificus   Magnaporthe sp. MG05   Brucella melitensis   Lepidium meyenii   Sodalis glossinidius   Murine leukemia virus isolates   Bemisia sp. Unknown_Th_13_12_S.lycopersicum   Shigella sonnei   Paenibacillus sp.   Montastraea cavernosa   Viola   Carica papaya   Sedum plumbizincicola   Ophrys x arachnitiformis subsp. archipelagi   Plasmodium falciparum   Dichomitus squalens   Dehalococcoides mccartyi BTF08   Asparagales   Geobacillus stearothermophilus   Tribolium castaneum   Quercus   uncultured Clostridium sp.   Neoseiulus barkeri   Lagenaria siceraria   Mycoplasma sp. enrichment culture   prokaryotic environmental samples   Neisseria meningitidis   Ganaspis   Aspergillus giganteus   Bacillariophyta   Drosophila   Staphylococcus lugdunensis   Streptomyces avidinii   Liberibacter endosymbiont of Diaphorina citri   Campylobacter jejuni subsp. jejuni 81-176-UMCW9   Mimiviridae   Mucuna sempervirens   Prunus domestica   Penicillium sp. B12   Penicilliopsis zonata   Muridae   Francisella tularensis subsp. tularensis SCHU S4   Staphylococcus cohnii   Rhizobium favelukesii   Cryptococcus neoformans   Rhodotorula toruloides   Scorpaena plumieri   Coxiella burnetii RSA 331   Radix auricularia   Frankia alni   Plasmodium berghei   Pseudomonas taiwanensis   Picrorhiza kurrooa   Kentrophoros sp. H   Saccharomyces mikatae IFO 1815   Ictalurus punctatus   Cupriavidus necator N-1   Deltacoronavirus PDCoV/USA/Illinois121/2014   Debaryomyces hansenii var. hansenii   Entamoeba histolytica   Photinus pyralis   Mycobacterium marinum   uncultured environmental isolates   Desulfoluna spongiiphila   Vibrio anguillarum   HIV-1 M:B_HXB2R   Burkholderia pseudomallei K96243   Streptomyces sp. MC1   Momordica cochinchinensis   Frankia alni ACN14a   Pseudomonas sp. UK4   Brucella abortus   Castor canadensis   Aliivibrio fischeri   Artemisia annua   Deinococcus radiodurans R1   Morganella   Allochromatium vinosum DSM 180   Saccharomyces cerevisiae W303   Fusarium oxysporum f. sp. lycopersici 4287   Xenopus tropicalis x Xenopus laevis   wastewater metagenome   Oreochromis mossambicus   Bacteroides sp. 1_1_11   Amphora coffeiformis   Salmonella enterica subsp. enterica serovar Typhimurium str. 5579   Campylobacter concisus UNSWCD   Blastococcus saxobsidens   Neisseria gonorrhoeae FA6140   Nippostrongylus brasiliensis   Chaetodon lunulatus   Planococcus halocryophilus Or1   Bradyrhizobium   Acinetobacter sp. SA01   Lolium perenne/Epichloe festucae mixed library   Paulownia   Acetomicrobium mobile   Lonicera japonica   Antheraea mylitta   Listeria monocytogenes serotype 4b str. F2365   Euglena gracilis   Ganoderma lucidum   Micrurus tener   Pseudotsuga menziesii var. menziesii   Burkholderia dolosa AU0158   Fusarium graminearum   Fibrobacter succinogenes subsp. succinogenes S85   Listeria monocytogenes serotype 4b str. 02-6679   Neisseria gonorrhoeae MS11   Nelumbo nucifera   Nostoc sp. PCC 7120 = FACHB-418   Hendra virus horse/Australia/Hendra/1994   Acinetobacter baumannii 44298_5   Prunus dulcis   Fusobacterium nucleatum   Clostridum phage CDHM6   Campylobacter fetus subsp. fetus   marine plankton environmental sample   Thymallus thymallus   Ophrys garganica   Persea americana   Thalassiosira oceanica   Populus yunnanensis   Mycolicibacterium smegmatis   Anser cygnoides   Quercus petraea   Lactiplantibacillus plantarum subsp. plantarum P-8   Oryctolagus cuniculus   anaerobic digester metagenome   Acidithiobacillus ferrooxidans ATCC 53993   Cancer irroratus   Celastrus   Cicer arietinum   Nitrospirillum amazonense CBAmc   Mycobacterium tuberculosis H37Ra   Tenebrio molitor   Sepioloidea lineolata   Gorilla gorilla gorilla   Sulfurospirillum multivorans   Candidatus Brocadia sapporoensis   Francisella tularensis subsp. novicida   Cupriavidus necator H16   Tremella   Microcebus murinus   Helicobacter pylori B8   Notamacropus eugenii   Klebsiella pneumoniae MGH 78578   (Vitis vinifera x Vitis berlandieri) x Vitis berlandieri   Desulfatiglans sp.   Haliotis laevigata   Ruminococcus bromii L2-63   Haemaphysalis longicornis   Ascoidea rubescens   Lactobacillus acidophilus NCFM   Toxoplasma   Mycobacteroides abscessus   Acanthoscurria gomesiana   Potentilla saundersiana   Sphingomonas sp. Leaf257   Tapirus terrestris   Punica granatum   Rathayibacter toxicus   Secale cereale   Equus asinus africanus   Staphylococcus aureus subsp. aureus str. Newman   Mesembryanthemum crystallinum   Cryptococcus neoformans var. grubii H99W   Haemophilus influenzae   environmental samples   Sporocytophaga myxococcoides   Ixodes scapularis   Brassica oleracea var. alboglabra   Piromyces sp.   Meiothermus sp.   Nannospalax galili   Vibrio campbellii ATCC BAA-1116   Bactrocera minax   Antipathes griggi   Teleogryllus oceanicus   Micromonas commoda   Vibrio alginolyticus   Lipomyces starkeyi   Porphyromonas gingivalis W50   Herpes simplex virus unknown type   Cytomegalovirus sp.   Photorhabdus laumondii   Moraxella catarrhalis   rat gut metagenome   Desulforapulum autotrophicum HRM2   Salmonella phage vB_SenM-S16   Mesocricetus auratus   Mycobacterium tuberculosis CDC1551   Streptomyces sp.   Synechocystis sp. CCALA 700   Yersinia ruckeri   Nitrosopumilus maritimus SCM1   Heloderma suspectum suspectum   Cryptosporidium parvum   Human betaherpesvirus 5   Pseudomonas weihenstephanensis   Nakazawaea wickerhamii   Human alphaherpesvirus 1 strain F   Solanum lycopersicum x Solanum tuberosum   Tremarctos ornatus   Influenza A virus (A/WSN/1933(H1N1))   Listeria monocytogenes EGD   Apteronotus leptorhynchus   Campylobacter jejuni subsp. jejuni 81-176   Eucalyptus spp. mixed library   Ruminiclostridium cellulolyticum H10   Dermatophagoides   Staphylococcus xylosus   Babesia bigemina   Helianthus tuberosus   SARS bat coronavirus   Pyricularia oryzae   Chlorocebus aethiops   Acanthamoeba polyphaga mimivirus   Botrytis cinerea   Zymoseptoria tritici IPO323   Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_50_11   Nicotiana langsdorffii   Minona ileanae   Nannochloropsis gaditana CCMP526   Picea abies   Theobroma cacao   Influenza A virus (A/California/07-00002/2009(H1N1))   albimanus section   Conus betulinus   Japanese encephalitis virus   Levilactobacillus brevis   Macrophomina phaseolina MS6   Heterocephalus glaber   Capsicum annuum   Olavius algarvensis Gamma 3 endosymbiont   Influenza A virus (A/Wilson-Smith/1933(H1N1))   Beta vulgaris   Populus tremula   Saimiri boliviensis boliviensis   Agkistrodon piscivorus   Viola inconspicua   Passer domesticus domesticus   Herbaspirillum seropedicae   Cellulophaga baltica 18   Naja annulifera   Helianthus annuus   Chlamydia trachomatis   Entamoeba histolytica HM-1:IMSS   Vibrio cyclitrophicus 1F53   Thermococcus gammatolerans   adeno-associated virus 2   Prevotella bryantii B14   Ornithodoros moubata   Phytophthora capsici LT1534   Saccharomyces cerevisiae YJM789   Salegentibacter sp. Hel_I_6   Hebomoia glaucippe   Passiflora edulis   Drosophila simulans   Vibrio sp. 57B112Y11   Debaryomyces fabryi   Elaeis guineensis   Broussonetia papyrifera   other sequences   Poterioochromonas malhamensis   Taeniopygia guttata   Staphylococcus epidermidis   Arabidopsis   Ursus maritimus   Datura stramonium   Pomacea maculata   Desulfovibrio ferrophilus   Halothiobacillus neapolitanus c2   Streptomyces sp. MBT42   Garcinia mangostana   Novosphingobium sp. Chol11   Rickettsia akari   Conus caracteristicus   Tradescantia spathacea   Populus tremula x Populus alba   Streptococcus equi subsp. equi 4047   environmental samples   Corallium rubrum   Odocoileus virginianus   methanotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen)   Brassica rapa   Xanthomonas campestris   Stigmatella aurantiaca DW4/3-1   Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499   Leishmania   Musa ABB Group   Giardia   Vibrio harveyi   Gossypium   Angiostrongylus cantonensis   Bacillus weihenstephanensis   Epinephelus coioides   Bicyclus anynana   Lachancea kluyveri   Cyanobacterium stanieri   Bacillus amyloliquefaciens   Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 = JCM 6387   Malassezia sympodialis ATCC 42132   Mustela putorius furo   Babjeviella inositovora NRRL Y-12698   Nicotiana rustica   Limosilactobacillus fermentum CECT 5716   Wolbachia endosymbiont of Diaphorina citri   Cyanistes caeruleus   Crassostrea gigas   Sarcoptes scabiei   Helicobacter pylori A45   unclassified Nanohaloarchaea   Mycoplasma genitalium   Mycoplasma suis KI3806   Trichoderma harzianum CBS 226.95   Naja nigricincta nigricincta   Staphylococcus aureus   Atta columbica   Shewanella oneidensis MR-1   Lontra canadensis   Gorilla gorilla   Chenopodium giganteum   Sinorhizobium americanum   Pseudomonas jessenii   Clavibacter michiganensis subsp. michiganensis NCPPB 382   Bodo saltans   Treponema   Staphylococcus aureus subsp. aureus NN50   Naja oxiana   Candidatus Margulisbacteria   Tropheryma whipplei TW08/27   Bacillus anthracis str. Ames   Serendipita vermifera 'subsp. bescii'   Blomia tropicalis   Listeria phage A118   Octopodiformes   Geobacillus sp. E263   Caballeronia mineralivorans   Harmonia axyridis   Yersinia enterocolitica   Liquorilactobacillus nagelii   Norovirus   Ferroplasma   Pandanus amaryllifolius   Saturnispora dispora   Capsaspora owczarzaki   Capra pyrenaica   Aspergillus niger CBS 513.88   Citrullus lanatus   Hominidae   Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   Bacteria incertae sedis   Lactobacillus delbrueckii   Nothobranchius furzeri   Astacus astacus   Klebsiella pneumoniae   Moorella thermoacetica ATCC 39073   Pseudomonas putida   Tospovirus kiwifruit/YXW/2014   Chlamydomonas reinhardtii   Thalassolituus oleivorans MIL-1   Triticum turgidum   Glycine soja   Komagataella phaffii   Ursus deningeri   Campylobacter jejuni subsp. jejuni   Daboia russelii   Lutra lutra   Escherichia phage vB_EcoP_SU10   microbial mat metagenome   Mycobacterium avium 100   Staphylococcus aureus subsp. aureus NCTC 8325   unclassified Bacteria   Streptomyces sp. Root66D1   Brucella   Methylorubrum extorquens PA1   Ceuthophilus sp. Ceu_104_TX_San_Rattlesnake   Melopsittacus undulatus   Pseudomonas fluorescens PF5   Gorilla   Francisella tularensis subsp. tularensis   Human adenovirus 2   Rosaceae   Pichia kudriavzevii   Vitis hybrid cultivar   Granulicella sp.   Megoura viciae   Clostridioides difficile R20291   Sinorhizobium americanum CCGM7   Colobus guereza   Pisum sativum   Streptococcus equi subsp. equi   Castanea mollissima   Streptococcus suis SC84   Citrus sinensis   Postia placenta   Murine respirovirus   Mollivirus sibericum   Channa striata   Sorghum bicolor   Exiguobacterium sp. SH31   Tortispora caseinolytica   Natronomonas pharaonis DSM 2160   Acinetobacter baumannii AB307-0294   Bungarus   Medicago sativa   Komagataella pastoris   Heliocidaris erythrogramma   Xanthomonas oryzae pv. oryzae PXO99A   Pseudomonas fluorescens group   Microcystis aeruginosa   Olavius algarvensis Delta 1 endosymbiont   Aspergillus nidulans TN02A3   Fagopyrum esculentum   Aspergillus flavus NRRL3357   Candidatus Riegeria   Bathymodiolus childressi   Brassica rapa subsp. pekinensis   Staphylococcus pasteuri   Sus scrofa domesticus   Pseudomonas aeruginosa LESlike1   Riptortus pedestris   Campylobacter fetus subsp. fetus 82-40   Coprothermobacter proteolyticus   Ogataea polymorpha   Cellvibrio japonicus Ueda107   Phikzvirus phiKZ   Mammalia   Bacteroides cellulosilyticus   Rahnella aquatilis   Oenococcus oeni   Giardia sp.   Limnobacter thiooxidans   Thalassiosira oceanica CCMP1005   Ambrosiozyma philentoma   SARS Coronavirus CDC#200301157   Gynandropsis gynandra   Platycladus orientalis   Leishmania major   Pseudo-nitzschia delicatissima   Eryx colubrinus loveridgei   cf. Chlorella sp.   Bacillus mycoides NBRC 101238 = DSM 11821   Coronavirus PREDICT CoV-19   Francisella tularensis subsp. mediasiatica   Canis lupus   Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821   Urechis unicinctus   Klebsiella pneumoniae ATCC BAA-2146   Beauveria bassiana ARSEF 2860   Plasmodium knowlesi strain H   Medicago tuberculata   Nicotiana bonariensis   Limosilactobacillus mucosae LM1   Pyrenochaeta sp.   Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   Halyomorpha halys   Guillardia theta CCMP2712   uncultured bacterium   Acanthamoeba castellanii str. Neff   Salmonella enterica subsp. enterica serovar Dublin   Avicennia   Alternaria tomato   Synechocystis sp. PCC 6803 substr. PCC-P   Chlorella sp. FC2 IITG   Saccharum sp.   Candidatus Pelagibacter ubique   Cereibacter sphaeroides 2.4.1   Schlechtendalia chinensis   Monilinia laxa   Marinobacter sp. DSM 26291   Pinus taeda   Panicum virgatum   Phytophthora capsici   Gnathostoma spinigerum   Euterpe oleracea   Staphylococcus aureus subsp. aureus USA300_TCH1516   Brassica oleracea   Microbacterium sp.   Roseburia hominis A2-183   Alteromonas macleodii ATCC 27126   Norovirus Hu/GII.4/Saga4/2009/JP   Pteropus alecto   Pseudomonas aeruginosa   Lactuca sativa   Skeletonema marinoi   Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10   Vibrio cholerae O395   Enterococcus mundtii CRL35   Aequorea victoria   Pongo abelii   Mus musculus wagneri   Bacillus pumilus SAFR-032   Triticum aestivum   Lotus japonicus   Norwalk virus   Prochlorococcus sp.   Microcystis aeruginosa NIES-843   Pythium sp. PV So7   Mammuthus   Photobacterium phosphoreum   Struthio camelus   Firmicutes MN01-01   Populus tomentosa   Madurella mycetomatis   Giardia intestinalis assemblage A   Rhinocerotidae   Acinetobacter baumannii ATCC 17978   unclassified Azonexus   Streptomyces roseifaciens   Bacillus thuringiensis   Leishmania sp. MHOM/IN/80/DD8   Clostridium autoethanogenum   Equidae   Oleidesulfovibrio alaskensis G20   Avena strigosa   Rhizobium sp. CIAT652   Galleria mellonella   Oryctolagus cuniculus cuniculus   Hemiscolopendra marginata   Brugia malayi   Firmicutes   Propionibacterium freudenreichii   Oleispira antarctica   Phomopsis sp. amygdali NY7157a   Pseudoalteromonas sp. D41   Nostoc punctiforme PCC 73102   Acinetobacter baumannii AB_TG2631   Azospirillum brasilense FP2   Leuconostoc gelidum subsp. gasicomitatum   Danio rerio   unclassified Thermococcus   Mycobacterium tuberculosis LAM7   Human coronavirus NL63   Serendipita vermifera MAFF 305830   Phascolarctos cinereus   Salmonella enterica subsp. enterica serovar Gallinarum str. 9184   Porphyridium purpureum   Conus frigidus   Ectocarpus siliculosus   Rhizophagus irregularis   Ovis   Xenopus laevis   Sulfurospirillum multivorans DSM 12446   Clostridioides difficile str. A-027   Clostridium   Bacteroides thetaiotaomicron   Spiroplasma melliferum KC3   Trichechus manatus   Panine betaherpesvirus 2   Acidovorax citrulli   Clostridium butyricum DSM 10702   Ecrobia   Piscirickettsia salmonis AUSTRAL-005   Mycoplasma gallisepticum S6   Parasteatoda tepidariorum   Nelumbo nucifera subsp. nucifera   Desmodesmus subspicatus   Penicillium rubens   Choloepus hoffmanni   Dryopteris affinis subsp. affinis   Myzus persicae   Toxoplasma gondii VEG   Naja pallida   Lilium   Macaca fascicularis   Streptococcus dysgalactiae subsp. equisimilis SK1249   Plum pox virus   Acinetobacter baumannii 1656-2   Emiliania   Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   Aspergillus carbonarius ITEM 5010   unidentified   Cercopithecidae   Rosa chinensis   Papio hamadryas   Dactylorhiza   Parasynechococcus marenigrum WH 8102   Dialister   Doryteuthis pealeii   Stagonospora   Paenibacillus polymyxa ATCC 842   Acidithiobacillus caldus   Sulfolobus islandicus   Lytechinus variegatus   Panthera tigris   Norovirus Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308   Populus trichocarpa   Vipera berus berus   Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314   Aspergillus flavus partitivirus 1   Plasmodium falciparum V1   Acetivibrio thermocellus DSM 1313   Coprothermobacter   Strigomonas culicis   Linum usitatissimum   Dolichospermum circinale AWQC131C   Mycobacterium tuberculosis EAI/OSDD271   Bacillus licheniformis   Dendroaspis polylepis polylepis   Xylocopa violacea   Rickettsia slovaca 13-B   Fusarium graminearum GZ3639   [Candida] auris   HIV-1 M:G_PT919   Dehalococcoides mccartyi CG1   Cryptococcus neoformans var. grubii H99S   Shigella flexneri 5a str. M90T   Methanothrix   Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   Myxobilatus gasterostei   Bifidobacterium pseudolongum   Pseudoxanthomonas sp.   Rhodococcus jostii RHA1   Capsicum annuum var. annuum   Burkholderia pseudomallei   Dorea formicigenerans   Mycobacterium tuberculosis H37RvAE   Nitrososphaera viennensis   Rattus norvegicus   Nicotiana benthamiana   Fomitopsis pinicola   Sparus aurata   Inquilinus limosus   Pristhesancus sp. 00004635   Streptomyces sp. EF-93   Porites lobata   Wolbachia pipientis wMelCS   Nicotiana longiflora   Nosema apis   Crotalus viridis   Bombus terrestris audax   Trypanosoma cruzi Dm28c   Bothrops atrox   Aspergillus   Brochothrix thermosphacta   Olavius algarvensis Delta 4 endosymbiont   Macaca fascicularis fascicularis   Salmonella enterica subsp. enterica serovar Typhi str. CT18   Nesocodon mauritianus   Sanghuangporus   Strongyloides venezuelensis   Lactobacillus iners   Rhodopseudomonas palustris   Crocuta crocuta   Plasmodium yoelii   Pseudomonas fluorescens   Dicentrarchus labrax   Toxoplasma gondii GAB3-2007-GAL-DOM9   Agkistrodon contortrix   Mammut americanum   mouse gut metagenome   Platichthys flesus   Bordetella pertussis Tohama I   Serpentes sp. WLS21042014   Klebsiella pneumoniae ATCC 43816   Veillonella dispar   Dengue virus   Fasciola hepatica   Gammarus fossarum   Sinorhizobium meliloti 1021   Entamoeba histolytica HM-1:IMSS-A   Pachycladon novaezelandiae   Toxoplasma gondii   Capra hircus   Chlamydia trachomatis E/C599   Aspergillus niger NRRL3   Microchaete diplosiphon CCALA 811   Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   Clostridium botulinum A str. Hall   Geodermatophilus obscurus DSM 43160   Pteropus rodricensis   Lacticaseibacillus casei W56   Pseudomonas amygdali pv. tabaci   Fragilariopsis cylindrus   Dugesia japonica   Canis dirus   Shigella dysenteriae   Glycine max x Glycine soja   Escherichia coli K-12   Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   Thiobacillus denitrificans ATCC 25259   Hadrurus spadix   Saccharum officinarum   Peromyscus leucopus   Craterostigma plantagineum   Anoplocephala perfoliata   Micrurus fulvius   Escherichia coli str. K-12 substr. MG1655   Ascaris suum   Clostridium butyricum E4 str. BoNT E BL5262   Francisella tularensis subsp. novicida U112   Hypsizygus marmoreus   Taiwanofungus camphoratus   Leishmania major species complex   Enterococcus faecium   Francisella tularensis subsp. holarctica   Bacteroidetes   Pseudomonas aeruginosa PAO1   Betacoronavirus sp.   unclassified Marseilleviridae   Methanospirillum hungatei JF-1   Nitrososphaera viennensis EN76   Marchantia polymorpha subsp. ruderalis   Kuraishia capsulata   Fusarium oxysporum f. sp. conglutinans Fo5176   Muvirus mu   Leymus chinensis   Human herpesvirus 4 strain B95-8   Bothrops alcatraz   Equus asinus   Pandoravirus dulcis   Corynebacterium glutamicum K051   Echis carinatus   Nicotiana benavidesii   Formosa agariphila KMM 3901   Capra hircus x Ovis aries   Panax ginseng   soil bacterium 10G-05   Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   Klebsiella pneumoniae subsp. pneumoniae KP5-1   Anopheles culicifacies A   Nicotiana glauca   Trypanosoma cruzi cruzi   Paracentrotus lividus   Xanthomonas citri pv. glycines str. 8ra   Arbacia punctulata   Vespula vulgaris   Plasmodium falciparum 58.1   Quercus ilex subsp. ilex   soil metagenome   Plasmodium cynomolgi strain B   Mollusca   Viruses   Agaricus bisporus   Clostridium cellulovorans   Oenothera elata   Avicennia officinalis   Severe acute respiratory syndrome coronavirus 2   Mylodon darwinii   Acheta domesticus   Pseudomonas syringae pv. syringae   Leptospira interrogans   Planctopirus limnophila DSM 3776   Bordetella bronchiseptica   Helicobacter pylori 26695   Citrus maxima   Aliivibrio salmonicida LFI1238   Pseudomonas putida BIRD-1   Angiostrongylus vasorum   Pseudomonas syringae pv. tomato   Candidatus Methylomirabilis oxyfera   Plasmodium sp. pBT9   Mycoplasma pneumoniae 19294   Daphnia pulex   Viola tricolor   Spodoptera frugiperda   Moringa oleifera   thiotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen)   SARS coronavirus Sin3765V   Paracoccus denitrificans   Oryza sativa Japonica Group   Serratia phage JS26   Bradypus variegatus   Yarrowia lipolytica   Laurasiatheria   Brucella anthropi ATCC 49188   Rhizobium leguminosarum bv. viciae   Lactobacillus   Petunia x hybrida   Sorghum bicolor x Saccharum hybrid cultivar   Leishmania infantum   Didelphis aurita   Bradyrhizobium diazoefficiens   Chitinophaga pinensis   Leishmania tarentolae   Megabalanus volcano   Mylodontidae   Leishmania mexicana   Sulfolobus acidocaldarius DSM 639   Doratifera vulnerans   Clostridioides difficile   Mastigamoeba balamuthi ATTC 30984   Neisseria gonorrhoeae   Gossypium hirsutum   Rhododendron hainanense   Phlebotomus papatasi   Synechococcus elongatus PCC 7942 = FACHB-805   Mycobacterium tuberculosis variant bovis AN5   Thermodesulfobium acidiphilum   Tilletia caries   Nanger dama mhorr   Dinosauria   Pasteurella multocida   Tetraponera aethiops   Halobacterium   Colobanthus quitensis   Lynx lynx   Corynebacterium diphtheriae   Treponema sp. T320A   Megalonychidae   Nannochloropsis oceanica strain IMET1   Novosphingobium nitrogenifigens   Leeuwenhoekiella sp. MAR_2009_132   Moneuplotes crassus   Mycoplasma pneumoniae M129-B7   Leptospirillum   uncultured soil bacterium S0164   Pseudotsuga menziesii   Pseudodiploria strigosa   Haemophilus influenzae Rd KW20   Coccidioides posadasii str. Silveira   Geobacillus thermoleovorans   Nicotiana forgetiana   Simmondsia chinensis   Bacillus methanolicus   Aspergillus versicolor   Ciona robusta   Amphimedon   Candidatus Syntrophoarchaeum butanivorans   Crocuta   Escherichia coli O157:NM   Pelea capreolus   Azotobacter vinelandii DJ   Paracoccus denitrificans PD1222   glacier metagenome   Plasmodium yoelii yoelii   Echis ocellatus   Apostichopus japonicus   Nilaparvata lugens   Nymphicus hollandicus   Cutibacterium acnes SK137   Physalis angulata   Naegleria fowleri   Burkholderia pseudomallei 1026b   Populus tremula x Populus tremuloides   Rhizobium leguminosarum bv. viciae 3841   Ficus carica   Sarcophilus harrisii   metagenomes   Bordetella pertussis   Brachionus plicatilis   Bacteroides fragilis NCTC 9343   Nicotiana repanda   Rhizorhabdus wittichii   Mycobacterium tuberculosis TKK-01-0032   Aspergillus flavus FRR 342   Candidatus Kuenenia stuttgartiensis   Dioscorea oppositifolia   Burkholderia ubonensis MSMB22   Sesamum indicum   Willaertia magna   Saccharomycopsis fibuligera   Penicillium verrucosum   Lobaria pulmonaria   Opisthorchis viverrini   Thermochaetoides thermophila   Staphylococcus aureus subsp. aureus USA300_FPR3757   Francisella hispaniensis   Solidesulfovibrio magneticus RS-1   Lactiplantibacillus plantarum subsp. plantarum   Modestobacter marinus BC501   Corucia zebrata   Borreliella burgdorferi 297   Takydromus sexlineatus   Clonorchis sinensis   Roseburia intestinalis L1-82   Lacrimispora saccharolytica   Thermosynechococcus vestitus BP-1   Daphnia   Microcystis aeruginosa PCC 7806   Carboxydothermus ferrireducens DSM 11255   Human papillomavirus type 16   Cancer   Pseudomonas aeruginosa ATCC 15442   Betainfluenzavirus   Borreliella burgdorferi   Fusarium cf. oxysporum   Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456   Drosophila mauritiana   Manduca sexta   Felis silvestris   Stappia stellulata DSM 5886   Catenibacterium   Vitis labrusca x Vitis riparia   Bacillus pseudomycoides DSM 12442   Catharanthus roseus var. roseus   Treponema medium   Streptomyces coelicolor   Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044   Haemonchus contortus   Arachis hypogaea var. vulgaris   Erythrobacter sp. HL-111   Escherichia coli O157:H7 str. EDL933   Pinus sylvestris   Orbicella annularis   H1N1 subtype   Phormidium sp. OSCR   Pseudomonas aeruginosa LESB58   Agrostis stolonifera   Phytophthora infestans T30-4   Brucella abortus 2308   Hepatitis E virus type 1   Cryptochiton stelleri   Pseudovibrio sp. FO-BEG1   Mycobacterium avium subsp. avium ATCC 25291   Ciona intestinalis   Paraescarpia cf. echinospica   Tetrahymena thermophila SB210   Homo sapiens subsp. 'Denisova'   Rhodobacter capsulatus SB 1003   Diplonema papillatum   Pseudomonas putida F1   Pyrococcus abyssi   Renibacterium salmoninarum ATCC 33209   Chlorocebus sabaeus   Clostridia   Bartonella quintana   Pectobacterium zantedeschiae   Necator americanus   Sphingobium sp. AM   Tomato spotted wilt orthotospovirus   Eimeria acervulina   Oenothera glazioviana   Staphylococcus haemolyticus   Human alphaherpesvirus 1   Oryza barthii   Scophthalmus rhombus   Cellulomonas sp. B6   Enterococcus faecalis str. Symbioflor 1   Komagataeibacter europaeus   Plasmodium yoelii 17X   Oomycota   Cassiopea xamachana   Enterobacteriaceae bacterium S16791   Agaricus bisporus var. bisporus   Cryptosporidium andersoni   Nematostella vectensis   Brassica oleracea var. italica   Paradendryphiella salina   Aiptasia   Fusarium oxysporum f. sp. cucumerinum   Parhyale hawaiensis   Chlorella sp. SAG 211-18   Phytophthora infestans   Trichomonas vaginalis G3   Agrostis capillaris   Trichinella britovi   Plasmodium vivax   Ascoidea rubescens DSM 1968   Antidorcas marsupialis   Crunoecia irrorata   Ehrlichia ruminantium str. Gardel   Olavius algarvensis spirochete endosymbiont   Diploria labyrinthiformis   Acanthochromis polyacanthus   Human herpesvirus 4 type 1   Aspergillus terreus   Clostridium cellulovorans 743B   Neurospora crassa   Lingula anatina   Saccharum hybrid cultivar   Klebsiella oxytoca   Scheffersomyces stipitis   Amphibalanus amphitrite   Plasmodium falciparum 3D7   Ailuropoda melanoleuca   Exidia glandulosa HHB12029   Rhizobium sp. Leaf68   Paracoccidioides lutzii Pb01   Centruroides hentzi   Cytophaga hutchinsonii   Strongylocentrotus purpuratus   Veillonella parvula DSM 2008   Babjeviella inositovora   Microbacterium oxydans   Pseudomonas aeruginosa str. E2UoS   Clostridium perfringens   Ambystoma mexicanum   hybrid   Ricinus communis   Fusarium oxysporum Fo47   Influenza A virus (H1N1)   Neocallimastigomycetes   Acetivibrio thermocellus   Zalophus californianus   Puccinia triticina   Vibrio vulnificus CMCP6   Epichloe festucae E2368   Mycoplasma hyopneumoniae J   Norovirus Hu/GII-4/Saga4/2006/JP   Francisella tularensis   Actinomycetia   Staphylococcus aureus subsp. aureus COL   Bithynia siamensis goniomphalos   Sepiadarium austrinum   sediment metagenome   Campylobacter jejuni 10227   Phaeocystis antarctica   Puccinellia tenuiflora   Helicoverpa armigera armigera   Pseudomonas aeruginosa PAK   Acanthoscurria rondoniae   Actinidia chinensis var. chinensis   Shigella flexneri 2a str. 2457T   Stichodactyla haddoni   Tuber albidum   Pseudoalteromonas sp. s-12   Eulimnogammarus cyaneus   Diplazium maximum   Verticillium dahliae JR2   Armoracia rusticana   Fusarium fujikuroi IMI 58289   Salmo sp.   Cenchrus americanus   Lingulodinium   Streptomyces sp. SirexAA-E   Dasypogon diadema   Capreolus capreolus   Calvadosia cruxmelitensis   Palaemonetes sp. common grass shrimp associated circular virus   Cyprinodon variegatus   Mycobacteroides abscessus ATCC 19977   Cocos nucifera   Pangasianodon hypophthalmus   Alteromonas macleodii   Osphranter rufus   Escherichia coli BL21(DE3)   Nitrospira marina Nb-295   Acidiphilium cryptum JF-5   Mesoplasma florum L1   Limosilactobacillus reuteri subsp. reuteri   Luteibacter   Myxococcus xanthus DZ2   Enterococcus faecium DO   Mycobacterium tuberculosis variant bovis   Roseibaca calidilacus   Crithidia fasciculata   Crotalus atrox   Pyrocystis lunula   Plasmodium falciparum NF54   Escherichia coli O157   Allexis   Frankliniella sp. BIOUG14947-G11   Picea asperata   Cupriavidus metallidurans   Anaerotignum neopropionicum DSM 3847   Craterostigmus tasmanianus   Streptococcus pneumoniae D39   Cricetidae   Myrmica rubra   Burkholderia cenocepacia K56-2Valvano   Podospora anserina   Helicobacter pylori   Ascoidea asiatica   Thermoplasma acidophilum DSM 1728   Scophthalmus maximus   HBV genotype D   Physcomitrium patens   Phoca largha   Lymnaea stagnalis   Streptococcus pyogenes serotype M2   Ralstonia solanacearum GMI1000   Mycobacterium tuberculosis SP13   Chloromonas nivalis   Cupriavidus basilensis   Lasionycta albinuda   Tarenaya hassleriana   Dinoroseobacter shibae DFL 12 = DSM 16493   Xanthomonas retroflexus   Babesia canis   Ursus arctos   Strigamia maritima   Theileria annulata strain Ankara   Peterozyma xylosa   Methylophaga thiooxydans DMS010   Hordeum vulgare subsp. vulgare   Panthera leo   Yersinia pestis KIM D27   Mycobacterium avium subsp. hominissuis   Mycoplasma pneumoniae M129   Rickettsia rickettsii   Mycoplasma mycoides   Steinernema carpocapsae   Ampulex compressa   Rheum palmatum   Erysiphe pisi   Chlamydia trachomatis D/UW-3/CX   Antheraea yamamai   Bienertia sinuspersici   Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon   Sulfurihydrogenibium   Canis lupus x Canis lupus familiaris   Saccharomyces cerevisiae EC1118   Naegleria sp. NGES2   Meriones unguiculatus   Rupicapra pyrenaica   Soa   Treponema ruminis   Coxiella burnetii   Mouse mammary tumor virus   Myrmica ruginodis   Mytilus edulis   Alicycliphilus denitrificans BC   Enterobacter cloacae   Loxosceles intermedia   Halomonas sp. HL-48   Chlorella vulgaris   Bacillus amyloliquefaciens DSM 7 = ATCC 23350   Megaloceros giganteus   Telmatactis   Treponema sp. T19   Philodryas patagoniensis   Lactococcus lactis subsp. cremoris UC509.9   Listeria monocytogenes 10403S   Peromyscus eremicus   Larix decidua   Nepenthes rafflesiana   Mucilaginibacter   Streptococcus dysgalactiae   Protopterus dolloi   Neocallimastix sp. G-1   Serratia marcescens   Paracatenula sp. 'standrea' Elba   Spondylus gaederopus   Leishmania infantum JPCM5   human metagenome   environmental samples   Synechococcus phage S-SSM7   Drosophila melanogaster   Leptospirillum ferriphilum   Amblyomma americanum   Sphingobium indicum B90A   Bacteria   Camponotus floridanus   Buchnera aphidicola (Acyrthosiphon pisum)   Coccinia grandis   Mytilus edulis/galloprovincialis MCLGV-2007   Orthopoxvirus   Cuniculiplasma divulgatum   Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841   Hordeum vulgare   Heterorhabditis megidis   Bovine leukemia virus   Riftia pachyptila   Aedes aegypti densovirus   Sordaria macrospora k-hell   Oreochromis niloticus niloticus   Severe acute respiratory syndrome-related coronavirus   Schistosoma japonicum   Streptococcus thermophilus LMD-9   Aeromonas salmonicida subsp. salmonicida   Pseudomonas sp. Root9   Malus domestica   Nicotiana x sanderae   Gadus morhua   Bothrops cotiara   Yersinia pestis CO92   Takydromus wolteri   Vigna mungo   Aspergillus nidulans FGSC A4   Mycobacterium marinum ATCC BAA-535   Pachycladon cheesemanii   Morganella   Pyrococcus furiosus   Citeromyces matritensis   Eriobotrya japonica   Nitrospira moscoviensis   Allobaculum sp.   uncultured marine microorganism   Noccaea caerulescens   Ctenopharyngodon idella   Anopheles gambiae str. PEST   Phaeodactylum tricornutum CCAP 1055/1   Bothrops bilineatus   environmental samples   Carya illinoinensis   Carausius morosus   Colon   Alnus glutinosa   Pichia fermentans   Caenorhabditis elegans   Shigella flexneri   Methylorubrum extorquens DM4   Amblyomma sculptum   Pseudomonas aeruginosa PA14-RN6   Esox lucius   Desulfobacteraceae bacterium   Nicotiana maritima   Bemisia cf. tabaci Middle East-Asia Minor 1   Globicatella sanguinis   Spirochaeta sp. ELBA   Klebsiella aerogenes   Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013   Dolichospermum circinale AWQC310F   Cowpox virus (Brighton Red)   Taxodium sp. 'Zhongshanshan'   Piper nigrum   Gammarus roeselii   Sistrurus miliarius barbouri   Coprococcus eutactus   Kluyveromyces marxianus DMKU3-1042   Saccharolobus solfataricus   Neosciurus carolinensis   Jatropha curcas   artificial sequences   Knufia petricola   Alcaligenes faecalis   Schizosaccharomyces pombe OY26   Thelohanellus kitauei   Crotalus adamanteus   Pseudomonas fluorescens SBW25   Aepyceros melampus   unclassified Candidatus Omnitrophica   Sitobion avenae   [Candida] boidinii   Ferrimicrobium acidiphilum DSM 19497   Dirofilaria immitis   Cricetulus griseus   Yersinia pestis YN2179   environmental samples   Sulfurospirillum cavolei NBRC 109482   Firmicutes bacterium   Gigantopelta aegis   Cucumber mosaic virus   Leptotrombidium deliense   Bacillus subtilis subsp. subtilis str. 168   Lactococcus lactis   Influenza A virus (A/Aichi/68/2007(H3N2))   Saccharomycopsis schoenii   Hyphomicrobium denitrificans ATCC 51888   Plasmodium falciparum Dd2   Staphylococcus pseudintermedius   Tomato yellow leaf curl virus   Glia   Amphibia   Clematis terniflora   Dionaea muscipula   Cecropia peltata   Magnetospirillum gryphiswaldense   Cytomegalovirus   Nevskia ramosa   Campylobacter concisus 13826   Phaeodactylum tricornutum   Aerococcus urinae NBRC 15544 = CCUG 36881   Desulfofundulus kuznetsovii DSM 6115   Plutella xylostella   Thermococcus gammatolerans EJ3   Carnobacterium maltaromaticum   Elizabethkingia meningoseptica   Pseudomonas syringae pv. actinidiae str. Shaanxi_M228   Acinetobacter sp. PM-14   Axis axis   Vibrio fluvialis   Phlebiopsis gigantea 11061_1 CR5-6   Chikungunya virus strain S27-African prototype   Clostridium botulinum F str. Langeland   Akkermansia muciniphila ATCC BAA-835   Trypanosoma cruzi   Staphylococcus sp. 1   Prunus avium   Bacteroides caccae   Mariprofundus ferrooxydans   Clarias gariepinus   Thermochaetoides thermophila DSM 1495   Bacillus cytotoxicus NVH 391-98   Dehalococcoides mccartyi CBDB1   Pseudomonas fragi   Tilletia indica   Lama glama   Trypanosoma brucei brucei   Burkholderia cenocepacia H111   Ianthella basta   Flavivirus   Perkinsus marinus   Peste des petits ruminants virus   Oncorhynchus mykiss   Halobacterium salinarum R1   Quercus ilex   Acaryochloris marina MBIC11017   Roseburia   Potato virus A   Cellulomonas fimi   Vitis vinifera   Balaenidae   Kayvirus kay   Bothrops neuwiedi   Burkholderia sp. H5.7(2011)   Pyrus x bretschneideri   Pinellia ternata   Musa acuminata AAA Group   Lentilactobacillus kefiri   Homo sapiens   Candidatus Accumulibacter phosphatis   [Ruminococcus] gnavus ATCC 29149   Vibrio vulnificus VV   Clostridium tetani E88   Listeria phage A500   Naja nigricollis   Eukaryota   Conus zonatus   Lens culinaris   Filifactor alocis   Leishmania braziliensis   Kalanchoe fedtschenkoi   wood decay metagenome   [Pennisetum] glaucum subsp. monodii   Paenarthrobacter nicotinovorans   Dendrobium huoshanense   Brucella sp.   Naja mandalayensis   Mesorhizobium japonicum MAFF 303099   Amphistegina lobifera   Oryctolagus sp. 'Rabbit_OD'   Triaenophorus crassus   Arion vulgaris   Marthasterias glacialis   Scolopendra morsitans   Breviatea   Pseudomonas sp. TDA1   Blattella germanica   Gelatoporia subvermispora   Mus musculus   Anisakis simplex complex   Staphylococcus saprophyticus   Tetronarce californica   Schizosaccharomyces pombe   Lolium arundinaceum   Brassica oleracea var. gemmifera   Naja sagittifera   Aspergillus fumigatus var. fumigatus   Litoditis marina   Klebsiella variicola   Caulobacter vibrioides CB15   Vipera ammodytes ammodytes   Aspergillus oryzae RIB40   Latrodectus hesperus   Pachysolen tannophilus   Porphyra purpurea   Candidatus Thiodictyon syntrophicum str. Cad16   environmental samples   Saccharomyces cerevisiae S288C   Mycobacterium tuberculosis SP10   Amphistegina   Salmonella enterica subsp. enterica serovar Typhimurium str. A130   Salmonella enterica subsp. enterica serovar Untypable str. 83332   Zingiber officinale   Cedrela fissilis   Sinapis alba   Thermus thermophilus   Calicophoron daubneyi   Helicobacter pylori 26695-1   Gemmatimonas phototrophica   Camelidae   Bacillus thuringiensis serovar kurstaki str. HD73   Saccharomyces uvarum   Perna viridis   Trypanosoma dionisii   Chlamydomonas reinhardtii CC3269   Euphorbia characias   Pinctada fucata   Bison   Trypanosoma cruzi marinkellei   Trichodesmium   Lentibacter algarum   Spongiibacter nanhainus   Acipenser baerii x Acipenser schrenckii   Methylotuvimicrobium alcaliphilum 20Z   Trichomonas vaginalis   Linnemannia elongata AG-77   Vertebrata   Tuber melanosporum Mel28   Bacteroides fragilis 638R   Syntrophomonas wolfei   Prevotella intermedia ATCC 25611 = DSM 20706   Afrohybanthus enneaspermus   Amycolatopsis   Pseudomonas aeruginosa PAO1H2O   Prochlorococcus marinus subsp. marinus str. CCMP1375   Cucumis sativus   Castor fiber   Daktulosphaira vitifoliae   Latilactobacillus sakei   Candidatus Accumulibacter   Delftia acidovorans SPH-1   Gyrodactylus kobayashii   Meleagris gallopavo   Bifidobacterium longum subsp. longum   Bathymodiolus azoricus   Chlamydia trachomatis L2/434/Bu(i)   Tursiops truncatus truncatus   Callinectes sapidus   Chinchilla lanigera   Populus deltoides   Aves   Neurospora crassa OR74A   Semliki Forest virus   Rhizopus delemar   Onchocerca lupi   Human alphaherpesvirus 1 strain 17   Neomegalonema perideroedes   Taenia solium   Aedes aegypti   Murine leukemia virus   Bothrops moojeni   freshwater sediment metagenome   environmental samples   Stenotrophomonas maltophilia   Serratia inhibens PRI-2C   Saccharum hybrid cultivar x Sorghum bicolor   Klebsiella pneumoniae 342   Leucoraja erinacea   Schizosaccharomyces pombe 927   Rupicapra rupicapra   Acinetobacter baumannii AB5075   Streptomyces lividans TK24   Trypanosoma erneyi   Aplysia californica   Toxoplasma gondii type III   Coprococcus sp. ART55/1   Plasmodium falciparum FcB1/Columbia   Dunaliella salina   Trichoderma sp. 1 YW-2011   Anastrepha ludens   Trichococcus sp. ES5   Bactrocera dorsalis   Aeromonas sp. enrichment culture clone AM2   Rhodothermus marinus DSM 4252   Cajanus cajan   Orbicella faveolata   Latilactobacillus curvatus   Aspergillus fischeri   Candidatus Methylomirabilis lanthanidiphila   Vibrio cholerae   Capsicum frutescens   Formosa sp. Hel1_33_131   phytoplankton environmental sample   Lactiplantibacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437   Ananas comosus var. bracteatus   Xenopsylla cheopis   Acyrthosiphon pisum   Clostridium saccharoperbutylacetonicum   Anneissia japonica   Streptococcus agalactiae serogroup V   Lentinus crinitus   Pseudomonas sp. phDV1   Hippophae rhamnoides   Teseptimavirus T7   permafrost metagenome   Sus scrofa scrofa   Caldanaerobacter subterraneus subsp. tengcongensis MB4   Paulinella chromatophora   Fusarium sp.   Coxsackievirus B3   Rhizobium cf. leguminosarum   Syntrophus aciditrophicus SB   Spongospora subterranea   Metopolophium dirhodum   uncultured Phormidium sp.   Influenza A virus   Andreprevotia sp. IGB-42   Ganoderma lingzhi   Rhizobium leguminosarum bv. viciae Vc2   Amaranthus tricolor   Cercospora armoraciae   Nothrotheriops shastensis   biofilm metagenome   Camellia sinensis   Daphnia magna   Desmodus rotundus   Escherichia coli O157:H7 str. TW14359   Mariprofundus ferrooxydans PV-1   Citrus sinensis x Citrus reticulata   Peniophora incarnata   Oscillatoriaceae cyanobacterium   Brachyspiraceae   Legionella pneumophila str. Paris   Mycoplasma feriruminatoris   Leishmania tropica   Synechocystis sp. PCC 6803 substr. GT-I   Puccinia triticina 1-1 BBBD Race 1   Mizuhopecten yessoensis   Pyricularia oryzae B157   Litoricola marina   Naja naja   Leishmania mexicana MHOM/GT/2001/U1103   Sinorhizobium meliloti BL225C   Meyerozyma guilliermondii   Corylus avellana   Sinopodophyllum hexandrum   Methanothermococcus thermolithotrophicus DSM 2095   Rhodopseudomonas palustris CGA009   Beauveria bassiana CGMCC 7.34   Olavius algarvensis Gamma 1 endosymbiont   Salmo salar   Macadamia   Fusarium oxysporum   Staphylococcus aureus subsp. aureus   Human herpesvirus 5 strain Merlin   Takifugu fasciatus   Andrographis paniculata   Burkholderia thailandensis   Bartonella quintana JK 31   Rhodobacter capsulatus   Haptophyta   Cupriavidus metallidurans CH34   Caryophyllales   Candidatus Paraburkholderia kirkii   Aedes albopictus   Bathymodiolus thermophilus   Conus monile   Paraconiothyrium   Mycobacterium tuberculosis KZN 1435   Rhodothermus marinus   Trichinella pseudospiralis   Colpophyllia natans   Crassostrea hongkongensis   Mycobacterium tuberculosis   Drosophila montana   Naja katiensis   Klebsiella pneumoniae BIDMC 40   Streptococcus pyogenes ABC020006030   Salmonella enterica subsp. enterica serovar Typhimurium str. ST1489   Panopea generosa   Trifolium pratense subsp. pratense   Cervus elaphus kansuensis   Amblyomma cajennense   Candida albicans   Rhizobium leguminosarum bv. phaseoli CCGM1   Klebsiella pneumoniae subsp. pneumoniae DSM 30104 = JCM 1662 = NBRC 14940   environmental samples   Metarhizium robertsii   Thermus thermophilus HB27   Candida parapsilosis   Spheniscus demersus   Schistocephalus solidus   Bos taurus   Wolbachia endosymbiont of Culex quinquefasciatus Pel   Hydrolagus colliei   Aquilaria sinensis   Bacillus toyonensis BCT-7112   Coffea canephora   Diaphorina citri   Brassica napus   Candidatus Protochlamydia amoebophila UWE25   Streptococcus suis SC149   Medicago truncatula var. truncatula   Ostreococcus tauri   Rhipicephalus pulchellus   Tilletia laevis   Synechococcus cyanophage syn   Aspergillus fumigatus Af293   Dickeya solani   Brucella abortus 104M   Ictidomys tridecemlineatus   Anopheles stephensi   Symbiodinium sp. ex Acropora millepora   Solanum peruvianum   Rangifer tarandus   Aspergillus terreus NIH2624   Listeria monocytogenes   Sulfuritalea   Methanoculleus sp. 10   Acinetobacter baumannii D1279779   Aeropyrum pernix   Onchocerca volvulus   Qipengyuania flava   Alteromonadales   [Candida] glabrata   Dickeya dadantii subsp. dadantii   Mytilus galloprovincialis   Human herpesvirus 8 strain rKSHV.219   Olindias sambaquiensis   Secale cereale x Triticum turgidum subsp. durum   Roseobacter denitrificans OCh 114   Aedes aegypti aegypti   Giardia intestinalis assemblage B   Coelodonta antiquitatis   Stegodyphus mimosarum   Crotalus cerberus   Ralstonia pickettii   Paenibacillus polymyxa   Breviolum minutum   Brucella melitensis bv. 1 str. 16M   Fusobacterium nucleatum subsp. nucleatum ATCC 25586   Bacillus cereus AH187   Azospirillum baldaniorum   Venturia pyrina   Pseudoalteromonas sp. CF6-2   Pisolithus tinctorius Marx 270   Escherichia coli Nissle 1917   Synechocystis sp.   Amycolatopsis mediterranei S699   Nicotiana clevelandii   Palaemon carinicauda   Schizosaccharomyces pombe DM3650   Chlamydomonas sp. UWO 241   Myxobolus wulii   Synechococcus sp. BL107   Populus cathayana   Brachylophosaurus canadensis   Trichomonas gallinae   Tetratrichomonas gallinarum   Thraustochytrium sp. ATCC 26185   Cyanophora paradoxa   Ovis canadensis mexicana   Leishmania mexicana mexicana   Sulfurospirillum halorespirans DSM 13726   Nepenthes ventricosa x Nepenthes alata   Recombinant Hepatitis C virus J6/JFH1-J6   Hevea brasiliensis   Cronobacter sakazakii   Sander lucioperca   Hediste diversicolor   Apostasia shenzhenica   Lichtheimia corymbifera JMRC:FSU:9682   Pseudomonas composti   Tachaea chinensis   Ceratonova shasta   Zea mays   Klebsiella pneumoniae UHKPC27   Viola tricolor subsp. tricolor   Laxus oneistus   Passer hispaniolensis   Streptococcus pneumoniae   Cingulata   Papaver somniferum   Dictyostelia   Solenopsis invicta   Sistrurus catenatus   Onchocerca ochengi   Ustilago maydis virus P4   Lactococcus lactis subsp. cremoris NZ9000   Stichopathes spiessi   Lacticaseibacillus rhamnosus   Brevibacterium casei   Apis mellifera mellifera   Streptomyces coelicolor A3(2)   Danaus plexippus   Dehalococcoides mccartyi   Hypsiglena jani   Vaccinia virus WR   Acinetobacter baumannii ACICU   Roseobacter sp. MED193   Gulo gulo   Methanothermobacter thermautotrophicus   Saccharomycopsis malanga   Pseudomonas plecoglossicida NB2011   Dendroaspis angusticeps   Musa AAB Group   Oryza sativa Indica Group   'Phaseolus vulgaris' phytoplasma   Mammuthus primigenius   [Ruminococcus] gnavus   Borreliella burgdorferi B31   Bartonella henselae str. Houston-1   unidentified marine bacterioplankton   Pseudo-nitzschia granii   Fraxinus nigra   Pseudoalteromonas rubra   Methermicoccus shengliensis DSM 18856   Human respiratory syncytial virus (strain RSB642)   Thermococcus kodakarensis KOD1   Polaribacter marinivivus   Volvariella volvacea V23   Acipenser transmontanus   Gallus   Mytilus sp. CHGF4   Malassezia pachydermatis   Saccharum spp. complex hybrid   Orthomyxoviridae   Sulfolobus islandicus LAL14/1   Trichinella spiralis   Asterias rubens   Pseudomonas lundensis   Enterococcus faecalis   Synechococcus sp.   Skeletonema dohrnii   Acanthoscurria geniculata   Chroococcidiopsis thermalis PCC 7203   Pseudomonas aeruginosa SJTD-1   Salmonella bongori   Fragaria x ananassa   Avian infectious bronchitis virus (strain Beaudette CK)   Ursus americanus   Stephanorhinus   Lactobacillus crispatus   Pseudomonas aeruginosa PA14   Acholeplasma laidlawii PG-8A   Phaedon cochleariae   Castanea sativa   Myxobolus honghuensis   unidentified chimeric sequence   Influenza A virus (A/California/07/2009(H1N1))   synthetic construct (code 12)   Aeropyrum pernix K1   Apis mellifera pomonella   Polyporus umbellatus GSX09   Pectobacterium carotovorum   Pedobacter sp.   Allomyrina   Balneola vulgaris   Eucalyptus   Pleurotus ostreatus PC9   Pseudomonas putida KT2440   Methylocystis sp.   Legionella   Nephila clavipes   Enchytraeus crypticus   Acesta excavata   Human gammaherpesvirus 4   Schizophyllum commune H4-8   Thermothelomyces heterothallicus   Prevotella ruminicola 23   Cannabis sativa   Plasmodium falciparum 365.1   Tetrahymena thermophila CU428   algae metagenome   Yersinia pseudotuberculosis   Acinetobacter calcoaceticus/baumannii complex   Mengo virus   Streptococcus pyogenes MGAS5005   Burkholderia sp. 2332   Lactococcus lactis subsp. cremoris MG1363   Ecrobia ventrosa   Microplitis mediator   Afipia carboxidovorans   Podospora anserina   Polytomella parva   Candidatus Carsonella ruddii DC   Heterosigma akashiwo   Cairina moschata   Mustela sp.   Heliocidaris tuberculata   Sindbis virus   Staphylococcus aureus subsp. aureus MRSA252   Gloeophyllum trabeum   Daucus carota subsp. sativus   Cylindrospermopsis raciborskii CS-506   Lactiplantibacillus plantarum   Acanthaster planci   Crocosphaera subtropica ATCC 51142   Myzus persicae persicae   Aspergillus fumigatus CEA10   Sulfolobus acidocaldarius   Nerodia clarkii   Nitrosomonas europaea ATCC 19718   Cephalotaxus hainanensis   Pogonomyrmex rugosus   Sulfolobus islandicus REY15A   Cyclopes didactylus   Flavobacterium sp. 316   Theileria annulata   uncultured soil bacterium S0137   Trichonephila clavipes   Quercus suber   Bacillus velezensis   Micrococcus luteus   Brucella abortus str. 2308 A   Nicotiana plumbaginifolia   Saccharopolyspora erythraea   Flavobacterium johnsoniae   Caulobacter vibrioides NA1000   Neisseria meningitidis MC58   Corynebacteriales   Elephas maximus   Blautia producta ATCC 27340 = DSM 2950   Nicotiana africana   Bivalvia   Cyanidioschyzon merolae   Lasiodiplodia theobromae   Pistacia vera   Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   Legionella pneumophila subsp. pneumophila   Synechococcus sp. CC9311   Trypanosoma   Prunus armeniaca   Pan troglodytes   Cellana toreuma   Arabidopsis thaliana   Naja ashei   Ophiophagus hannah   Nicotiana paniculata   Coffea arabica   Argulus foliaceus   Bothrops brazili   Russula atropurpurea   Xanthomonas translucens   Wolbachia sp. wMelPop   Verticillium longisporum   Streptococcus agalactiae   Amblyomma   Kluyveromyces lactis NRRL Y-1140   Python bivittatus   Pseudomonas ogarae   Brenneria nigrifluens   Phoneutria nigriventer   Aggregatibacter aphrophilus   Leptopilina   Burkholderia sp. Bk   Helicobacter pylori J99   Serratia plymuthica   Hadronyche infensa   Solanum tuberosum   Musa   Pseudomonas pseudoalcaligenes CECT 5344   uncultured microorganism   Neoporphyra haitanensis   Influenza B virus (B/Memphis/13/2003)   Formosa sp. Hel3_A1_48   Leptopilina heterotoma   Deinococcus deserti VCD115   Trichoderma atroviride   Spongospora sp.   Butyrivibrio proteoclasticus B316   Platynereis dumerilii   Rosa hybrid cultivar   Santalum album   Ecrobia maritima   Physcomitrium sp. Goffinet 11574   Lysiphlebus fabarum   Neisseria meningitidis serogroup B   Fusobacterium nucleatum subsp. nucleatum ATCC 23726   Neospora caninum Liverpool   Lactobacillus johnsonii N6.2   Streptococcus uberis   Aggregatibacter actinomycetemcomitans   Escherichia coli str. K-12 substr. W3110   Panagrolaimus   Corynebacterium glutamicum ATCC 13032   Prototheca zopfii   Candida tropicalis   Cervus nippon hortulorum   Sulfurospirillum cavolei   Picrophilus torridus   Delonix regia   Lentinula edodes   Bacillus thuringiensis Bt407   Pachycladon enysii   Botryococcus braunii   Anaerostipes caccae L1-92   Rhynchocyon petersi   Stylosanthes guianensis   Bothrops asper   Nicotiana sylvestris   Odontotaenius disjunctus   Leishmania donovani   Architeuthis dux   Histoplasma capsulatum   Desulfovibrio sp. G11   Tetranychus urticae   Treponema pedis   Colinus virginianus   Equisetum arvense   Fusarium virguliforme   Mycobacterium sp. GN-10803   Acidipropionibacterium acidipropionici   Aspergillus aculeatus ATCC 16872   Phytophthora sojae   Liquorilactobacillus hordei   Hyalella azteca   Conus striatus   Polynucleobacter asymbioticus   Saccharomyces cf. cerevisiae   Coronavirus PREDICT CoV-2   Triticum monococcum subsp. monococcum   uncultured soil microorganism   Cucurbita maxima   Hippoglossus stenolepis   Spiroplasma melliferum   Taraxacum   Schistosoma haematobium   Tannerella forsythia   Clavispora lusitaniae ATCC 42720   Vibrio cholerae O1 biovar El Tor str. N16961   Corynebacterium diphtheriae NCTC 13129   Naja subfulva   Oryza australiensis   Salmonella enterica subsp. enterica serovar Typhimurium   Nepenthes x hookeriana   Klebsiella variicola At-22   Tupavirus   Starmerella bombicola   Mycoplasma pneumoniae   Brassica rapa subsp. rapa   Lingulodinium polyedra   Clostridioides difficile 050-P50-2011   Leishmania   Sphingobium chlorophenolicum   Vicia faba   Citrobacter freundii   Fagus grandifolia   Blumeria graminis f. sp. tritici   Pseudomonas sp.   Viridiplantae   Chlorocebus aethiops aethiops   Nannochloropsis gaditana   Anopheles culicifacies B   Raoultella sp.   Gammarus pulex   Rickettsia conorii subsp. raoultii   Camponotus fellah   Myotis lucifugus   Anisakis simplex   Brachypodium distachyon   Spinacia oleracea   Aspergillus sydowii   Methanobacterium   Trypanosoma brucei   Penicillium oxalicum   Human immunodeficiency virus 1   Listeria monocytogenes EGD-e   Pseudodiploria clivosa   Lasius niger   Aspergillus wentii   Antheraea pernyi   Dreissena polymorpha   Anas platyrhynchos   Kluyveromyces marxianus   Mycobacterium tuberculosis SP7   unclassified virophages   Bordetella parapertussis   Oryctolagus cuniculus algirus   Bacillus subtilis PY79   Lactobacillus crispatus EX533959VC03   Rhodopseudomonas palustris TIE-1   Rhodnius prolixus   Acromyrmex echinatior   Treponema phagedenis   Piaractus mesopotamicus   Cellulomonas gilvus ATCC 13127   Escherichia coli HT115   Bacillus sp. 142311   Pachycladon fastigiatum   Phormidium rubidum A09DM   Citrus wilsonii   Geobacillus kaustophilus   Euzebya tangerina   Francisella tularensis subsp. holarctica LVS   Avena sativa   Escherichia coli O157:H7   Plasmodium falciparum Mad71/Papua New Guinea   Cryptococcus neoformans var. grubii H99   Juglans   Frankia coriariae   Wheat dwarf virus - [Taiyuan]   Vibrio cholerae V52   Anaeromyces   Bubalus bubalis bubalis   Mangifera indica   Histomonas meleagridis   Streptococcus mutans   Rickettsia massiliae MTU5   Polynucleobacter asymbioticus QLW-P1DMWA-1   Bursaphelenchus xylophilus   Geobacillus kaustophilus HTA426   Rickettsia conorii str. Malish 7   Martes martes   Picea likiangensis var. rubescens   Babesia canis canis   Nicotiana quadrivalvis   Streptococcus pneumoniae SP14-BS69   Desulforamulus reducens MI-1   Olea europaea   Bacillus cereus ATCC 14579   Leptopilina boulardi   Macrophomina phaseolina   Dictyostelium discoideum   Nicotiana noctiflora   Sordaria macrospora   Archaea   Bemisia tabaci   Diuraphis noxia   Pinus radiata   Bacteroides thetaiotaomicron VPI-5482   Mycobacterium tuberculosis K   Gardnerella vaginalis   Equus hydruntinus   Emiliania huxleyi virus 207   Solanum lycopersicum   Desulfurella amilsii   Anaerostipes rhamnosivorans   Bothrops jararacussu   Psychroflexus torquis ATCC 700755   Haliotis discus hannai   Cyanea capillata   Rhodococcus qingshengii   Homo   Malassezia furfur   Pongo pygmaeus   Giardia intestinalis   Escherichia coli O26:H11   Syntrophobacter fumaroxidans MPOB   marmosets   Bombus terrestris   Ruegeria pomeroyi   Bos indicus   Kryptolebias marmoratus   Trypanosoma vivax Y486   Salmo trutta trutta   Campylobacter jejuni subsp. jejuni 81116   Arthrobacter sp. HG   Pseudomonas syringae   Methanosarcinales archaeon   Trichoplax sp. H2   Oryza sativa   Samia ricini   Candida tropicalis MYA-3404   Ceratopteris richardii   Methanosarcina mazei Go1   Thalassiosira cf. oceanica   Cowpox virus   Pundamilia nyererei   Toxoplasma gondii PRU   Potato leafroll virus   Megatheriidae   Streptococcus mutans UA159   Saccharum hybrid cultivar SP80-3280   Litomosoides sigmodontis   Human immunodeficiency virus type 1 3916-CRO   Hepatitis B virus   Takydromus septentrionalis   Pyricularia oryzae P131   Ovis aries musimon   Silurus glanis   Streptococcus pyogenes M1 GAS   Tuwongella immobilis   Chenopodium quinoa   Citrobacter rodentium ICC168   Tritrichomonas foetus   Capra ibex   Nostoc sp. FB71   Vaccinia virus   Bacillus anthracis str. Sterne   Biomphalaria glabrata   Mycobacterium tuberculosis str. Beijing/W BT1   Myodes glareolus   Cryptococcus neoformans var. grubii VNI   Colwellia psychrerythraea 34H   Clostridium acetobutylicum   Buddenbrockia plumatellae   Sorangium cellulosum So ce56   Pseudomonas sp. 'Pseudom. M1'   Trypanosoma cruzi strain CL Brener   Octopus vulgaris   Human immunodeficiency virus   Trichoderma reesei RUT C-30   Cyprinus carpio   Cricetulus barabensis   Mycoplasma gallisepticum str. R   Drosophila pseudoobscura   Dinothrombium   Microbiota   Eimeria tenella   Melioribacter roseus P3M-2   Mytilus californianus   Listeria monocytogenes serotype 4b   mixed sample   Marchantia polymorpha   Coxiella-like endosymbiont of Rhipicephalus sanguineus complex   Candidatus Nitrospira inopinata   Camelus dromedarius   Mycoplasma gallisepticum   Cladocopium goreaui   Mollisia scopiformis   Citrobacter rodentium   Bradyrhizobium japonicum   Morchella importuna   Neopyropia yezoensis   Canavalia ensiformis   Tyrannosaurus rex   Dimocarpus longan   Microbacterium sp. LEw-1055   Oreochromis niloticus   Thermoclostridium stercorarium   Leuconostoc gelidum subsp. gelidum   environmental samples   Plasmodium vivax Sal-1   Komagataella phaffii GS115   Scutigera coleoptrata   Thalassiosira pseudonana   Sophora alopecuroides   Lupinus angustifolius   Phycicoccus elongatus Lp2   Trichuris muris   Olavius algarvensis sulfate-reducing endosymbiont   Candida albicans 24C   Taraxacum sp.   Haloferax volcanii DS2   Synechocystis sp. PCC 6803 substr. GT-S   Lactococcus lactis subsp. lactis Il1403   Tannerella forsythia 92A2   Bothrops leucurus   Ixodes ricinus   Abelmoschus esculentus   Methanosarcina acetivorans   Manihot esculenta   Chlamydia trachomatis L2/434/Bu(f)   Acetobacterium wieringae   Bordetella bronchiseptica RB50   Nosema ceranae   Faecalibacterium prausnitzii   Klebsiella pneumoniae 1162281   Candidatus Glomeribacter   Vaccinium angustifolium   Labeo rohita   Lachancea waltii NCYC 2644   Saiga tatarica   Candidatus Thiosymbion oneisti   Sylvicapra grimmia   Middle East respiratory syndrome-related coronavirus   Trypanosoma rangeli SC58   Methanococcus voltae A3   Nepenthes ampullaria   Triticum turgidum subsp. durum   Dictyostelium discoideum AX4   uncultured Desulfobacterium sp.   Toxoplasma gondii CtCo5   Mycobacterium tuberculosis M24   Jaltomata herrerae   Deinococcus radiodurans   Bjerkandera adusta   Cloning vector pEGFP-C1   Loxodonta africana   Syntrophus aciditrophicus   Actinomyces oris   unclassified Peptococcaceae   Amblyrhynchus cristatus   Streptococcus sanguinis SK36   Oncorhynchus tshawytscha   Phytophthora pisi   Streptococcus pyogenes STAB901   Hyphomicrobium sp. MC8b   Priestia megaterium DSM 319   Aedes   Cladosporium herbarum   BK polyomavirus MM   Crocus sativus   Agkistrodon   Penium margaritaceum   Burkholderia cenocepacia   Rousettus aegyptiacus   Viscum album   Physcomitrella   Haloferax mediterranei ATCC 33500   Faecalibacterium duncaniae   Brassica carinata   Xenopus tropicalis   marine sediment bacterium ISA-3146   Fusarium oxysporum f. sp. vasinfectum 25433   Streptococcus thermophilus   Salmonella enterica subsp. enterica serovar Enteritidis   Corynebacterium ulcerans bv. belfanti   Plasmodium yoelii yoelii 17XNL   Malassezia sympodialis   Synechocystis sp. PCC 6803   Xanthomonas oryzae pv. oryzae KACC 10331   Pinus nigra   Histoplasma capsulatum G186AR   Mycobacterium tuberculosis CAS   Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088   Influenza A virus (A/Viet Nam/1203/2004(H5N1))   Vibrio cholerae O1 str. VC91   Anoxybacillus caldiproteolyticus   Pleuromamma xiphias   Mycobacterium tuberculosis SP22   gut metagenome   Tepidimicrobium xylanilyticum   Eucalyptus grandis   Aspergillus flavus   Schmidtea mediterranea   unclassified Bacillarnavirus   Hylobius abietis   Hippopotamus amphibius   Toxoplasma gondii GT1   Nostoc sp.   Rapana venosa   Brassica oleracea var. botrytis   Corynebacterium glutamicum   Mycobacterium tuberculosis H37Rv   Paramecium tetraurelia   Cyberlindnera jadinii   Polypodium hydriforme   Synechococcus phage syn9   Streptomyces sp. MBT84   Rhodospirillum rubrum ATCC 11170   Synechocystis sp. PCC 6803 substr. Kazusa   Fusarium oxysporum f. sp. lycopersici   Hepatitis C virus genotype 1   Giardia lamblia ATCC 50803   Trypanosoma brucei brucei TREU927   Bifidobacterium longum NCC2705   Mycoplasma pneumoniae M29   Periplaneta americana   Antarctonemertes valida   Coprococcus comes ATCC 27758   Erysipelothrix rhusiopathiae   Babesia sp.   Sinorhizobium meliloti   Eriocheir sinensis   Corynebacterium diphtheriae bv. mitis str. ISS 3319   Mycobacterium avium subsp. paratuberculosis   Tomato mottle virus   Human coronavirus HKU1   Naja mossambica   Granulicatella adiacens ATCC 49175   Acidithiobacillus ferrooxidans   Eremothecium gossypii   Escherichia phage T7   Larimichthys crocea   Treponema denticola ATCC 35405   Taenia hydatigena   environmental samples   Oncorhynchus kisutch   Streptomyces lincolnensis   Wenzhouxiangellaceae bacterium   Mycoplasmopsis agalactiae   Accipitridae   Rhizoctonia solani AG-8 WAC10335   Alphainfluenzavirus   Cyclotella cryptica   Pseudomonas aeruginosa UCBPP-PA14   Callithrix jacchus   Human herpesvirus 5 strain AD169   Lentimonas   Musa acuminata subsp. acuminata   Methanoculleus sp.   Fusarium pseudograminearum   Lacticaseibacillus rhamnosus GG   Nakazawaea peltata   Ophrys sphegodes   Bombyx mori   Trichodesmium erythraeum IMS101   Foeniculum vulgare   Aspergillus niger   Mycoplasma capricolum   Ancylostoma caninum   Trichoplusia ni   bioreactor sludge metagenome   Gossypium robinsonii   Borrelia sp. BC7   Mycobacterium tuberculosis C StG4006   Pinus pinaster   Venturia inaequalis   Nicotiana glutinosa   Bacillus subtilis subsp. subtilis   Erysipelatoclostridium ramosum DSM 1402   Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759   Lathyrus sativus   Plasmodium falciparum NF135/5.C10   Desulfovibrio vulgaris str. Hildenborough   Bradyrhizobium diazoefficiens USDA 110   Tequatrovirus T4   Coilia nasus   Trifolium pratense   Cervus elaphus   Mycolicibacterium smegmatis MKD8   Nicotiana gossei   Anacardium occidentale   Valsa mali   Caretta caretta x Chelonia mydas   Dendrobium sp. XMW-2002-13   Haloferax volcanii   Sepia officinalis   Echis carinatus sochureki   Pseudomonas sp. Lz4W   Meyerozyma guilliermondii ATCC 6260   Bacillus mycoides DSM 2048   Rattus rattus   Mammuthus sp.   Cellulophaga baltica NN016038   Vulpes vulpes   Antheraea assamensis   Alligator sinensis   Helicobacter pylori E48   Thalassiosira pseudonana CCMP1335   Pituophis melanoleucus   Siphoviridae   Influenza A virus (A/Panama/2007/1999(H3N2))   Phalaenopsis amabilis   Talaromyces funiculosus NCIM1228   Vitis riparia x Vitis rupestris   Brucella abortus S19   Clostridium phage c-st   Salvelinus namaycush   Leishmania donovani BPK282A1   Culex pipiens pipiens   Plethodon shermani   Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2   Setaria italica   Coffea eugenioides   Streptococcus pyogenes   Human alphaherpesvirus 1 strain KOS   Staphylococcus lugdunensis N920143   Rhipicephalus sanguineus complex sp. ME-2011   human gut metagenome   Scolopocryptops sexspinosus   Nitrosospira multiformis ATCC 25196   Flavobacterium columnare   Stichopathes   Glossina morsitans   Mycoplasmopsis bovis HB0801   Halomonas sp.   Mycoplasma hominis ATCC 23114   Triatoma sordida   Paeniclostridium sordellii ATCC 9714   Staphylococcus sp. KDM4   Anopheles albimanus   Azumapecten farreri   Suidae   Spirometra erinaceieuropaei   Escherichia coli   environmental samples   Streptococcus pneumoniae TIGR4   Aeromonas hydrophila subsp. hydrophila ATCC 7966   Aspergillus brasiliensis   Francisella tularensis subsp. holarctica FSC200   Entamoeba histolytica HM-1:IMSS-B   Python molurus   Listeria monocytogenes serotype 1/2a   Bacillus altitudinis   Pimephales promelas   Buchnera aphidicola str. APS (Acyrthosiphon pisum)   Leishmania major strain Friedlin   Butyrivibrio fibrisolvens   Acinetobacter baylyi ADP1   Candidatus Electronema   Klebsiella phage ST405-OXA48phi1.1   Saccostrea glomerata   Influenza A virus (A/New Caledonia/20-JY2/1999(H1N1))   Brassica oleracea var. capitata   Vitis   Dioscorea alata   Coxiella burnetii RSA 493   Saccharomycopsis capsularis   Argopecten irradians   Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120200   Paulownia fortunei   Rhodotorula glutinis   Thermus thermophilus HB8   Pyricularia oryzae 70-15   Abyssorchomene distinctus   Mycobacterium tuberculosis C   Campylobacter jejuni 10186   Bacillus cereus   Medicago truncatula   Thermoanaerobacter pseudethanolicus   Macaca mulatta  

TISSUE(S): Blood Plasma

DISEASE(S): Cardiovascular System Disease

SUBMITTER: Nathalie Pamir  

LAB HEAD: Nathalie Pamir

PROVIDER: PXD009473 | Pride | 2019-04-24

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
151802_2HMDP145.raw Raw
151802_2HMDP146.raw Raw
151802_2HMDP147.raw Raw
151802_2HMDP148.raw Raw
151802_2HMDP149.raw Raw
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Publications

Genetic control of the mouse HDL proteome defines HDL traits, function, and heterogeneity.

Pamir Nathalie N   Pan Calvin C   Plubell Deanna L DL   Hutchins Patrick M PM   Tang Chongren C   Wimberger Jake J   Irwin Angela A   Vallim Thomas Q de Aguiar TQA   Heinecke Jay W JW   Lusis Aldons J AJ  

Journal of lipid research 20190108 3


HDLs are nanoparticles with more than 80 associated proteins, phospholipids, cholesterol, and cholesteryl esters. The potential inverse relation of HDL to coronary artery disease (CAD) and the effects of HDL on myriad other inflammatory conditions warrant a better understanding of the genetic basis of the HDL proteome. We conducted a comprehensive genetic analysis of the regulation of the proteome of HDL isolated from a panel of 100 diverse inbred strains of mice (the hybrid mouse diversity pane  ...[more]

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