Proteomics

Dataset Information

HiRIEF TMT Proteomics of Arabidosis thaliana, wildtype versus oligopeptidases' KO mutants

ABSTRACT: Oligopeptidases Prep and OOP are enzymes located in mitochondria and chloroplasts responsible for the cleavage of long peptides (8 to 65 aas) down to short peptides (3 to 7 aas), which in turn are degraded to free amino acids by aminopeptidases such as M1 and M17. In this study, Arabidopsis thaliana knockout mutants of the genes for these enzymes were studied by proteomics using a TMT (tandem mass tags) isobaric tags quantification strategy combined with HiRIEF LC-MS on a Q-Exactive Mass Spectrometer.

INSTRUMENT(S):

ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)

TISSUE(S): Plant Cell, Leaf

SUBMITTER: Rui Branca  

LAB HEAD: Janne Lehtiö

PROVIDER: PXD009651 | Pride | 2018-11-14

REPOSITORIES: Pride

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Dataset's files

Source:
Action DRS
Arabidopsis-youngest-leaves-proteome_WT-and-PreP-OOP-knockout-mutants_Araport11_peptide_table.txt Txt
Arabidopsis-youngest-leaves-proteome_WT-and-PreP-OOP-knockout-mutants_Araport11_protein_table.txt Txt
Arabidopsis-youngest-leaves-proteome_WT-and-PreP-OOP-knockout-mutants_Araport11_psm_table.txt Txt
Rui_Pedro_Arabidopsis_proteomics_20160830_HF_400ugIPG3-10_fr01.raw Raw
Rui_Pedro_Arabidopsis_proteomics_20160830_HF_400ugIPG3-10_fr02.raw Raw
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