Quantitative Analysis of Global Proteome in Arabidopsis thaliana
Ontology highlight
ABSTRACT:
INSTRUMENT(S): Q Exactive
ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)
SUBMITTER: 
xiaomei li
LAB HEAD: lirong sun
PROVIDER: PXD011814 | Pride | 2019-11-12
REPOSITORIES: Pride
Publications
Transcriptome-wide analysis of pseudouridylation of mRNA and non-coding RNAs in Arabidopsis.
Sun Lirong L Xu Yuxing Y Bai Shenglong S Bai Xue X Zhu Huijie H Dong Huan H Wang Wei W Zhu Xiaohong X Hao Fushun F Song Chun-Peng CP
Journal of experimental botany 20191001 19
Pseudouridine (Ψ) is widely distributed in mRNA and various non-coding RNAs in yeast and mammals, and the specificity of its distribution has been determined. However, knowledge about Ψs in the RNAs of plants, particularly in mRNA, is lacking. In this study, we performed genome-wide pseudouridine-sequencing in Arabidopsis and for the first time identified hundreds of Ψ sites in mRNA and multiple Ψ sites in non-coding RNAs. Many predicted and novel Ψ sites in rRNA and tRNA were detected. mRNA was ...[more]
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