Proteomics

Dataset Information

Glioblastoma serum biomarkers identification by iTRAQ


ABSTRACT: Glioblastoma (GBM) is the most aggressive form of astrocytoma and is difficult to diagnose at early stage. In this study, our goal is to find and validate biomarkers for GBM through serum proteome expression profiling, which would assist in the early diagnosis, and management of GBMs. In the discovery phase, we performed shotgun proteomics of control and GBM pooled serum samples using untargeted 4-plex iTRAQ (isobaric Tags for Relative and Absolute Quantitation) mass spectrometry to identify candidate biomarkers with differential abundance The two candidates, S100A8 and S100A9 were prioritized for verification based on their maximal abundance in GBM serum in our discovery phase.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Blood Serum

DISEASE(S): Brain Glioblastoma Multiforme

SUBMITTER: Anjali Arora  

LAB HEAD: Prof. Kumaraval Somasundaram

PROVIDER: PXD012207 | Pride | 2019-03-04

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
PXD012207_community_annotated.sdrf.tsv Tabular
iTRAQ_F01.RAW Raw
iTRAQ_F02.RAW Raw
iTRAQ_F03.RAW Raw
iTRAQ_F04.RAW Raw
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