Proteomics

Dataset Information

0

Geobacter sulfurreducens and Pseudomonas aeruginosa adapted cocultures SWATH-MS


ABSTRACT: In this study we further investigate the previously observed syntrophic interaction between Geobacter sulfurreducens and Pseudomonas aeruginosa. In early coculture establishment, two genetic variants of G. sulfurreducens emerged that were strongly selected for throughout coculture evolution. Single nucleotide polymorphism (SNP) variants occurred in fabI and tetR genes of G. sulfurreducens. The tetR variants displayed upregulation of adenylate cyclase transporter, CyaE and of RND efflux pump proteins as determined through SWATH-MS proteomics.

INSTRUMENT(S): TripleTOF 5600

ORGANISM(S): Geobacter Sulfurreducens Pca Bacteria

SUBMITTER: Lucie Semenec  

LAB HEAD: Ashley E Franks

PROVIDER: PXD013990 | Pride | 2020-04-20

REPOSITORIES: Pride

altmetric image

Publications

Adaptive Evolution of Geobacter sulfurreducens in Coculture with Pseudomonas aeruginosa.

Semenec Lucie L   Vergara Ismael A IA   Laloo Andrew E AE   Petrovski Steve S   Bond Philip L PL   Franks Ashley E AE  

mBio 20200407 2


Interactions between microorganisms in mixed communities are highly complex, being either syntrophic, neutral, predatory, or competitive. Evolutionary changes can occur in the interaction dynamics between community members as they adapt to coexistence. Here, we report that the syntrophic interaction between <i>Geobacter sulfurreducens</i> and <i>Pseudomonas aeruginosa</i> coculture change in their dynamics over evolutionary time. Specifically, <i>Geobacter</i> sp. dominance increases with adapta  ...[more]

Similar Datasets

2022-02-17 | PXD027104 | Pride
2016-05-13 | E-GEOD-80421 | biostudies-arrayexpress
2012-06-04 | E-GEOD-36340 | biostudies-arrayexpress
2016-01-08 | E-GEOD-76522 | biostudies-arrayexpress
2014-05-08 | PXD000684 | Pride
2014-08-04 | E-GEOD-57284 | biostudies-arrayexpress
2015-08-04 | E-GEOD-65356 | biostudies-arrayexpress
2012-11-29 | E-GEOD-42571 | biostudies-arrayexpress
2013-12-12 | E-GEOD-53226 | biostudies-arrayexpress
2010-08-30 | E-MTAB-321 | biostudies-arrayexpress