Proteomics

Dataset Information

0

Assembly of a nuclear lamin coil 2 fragment


ABSTRACT: Nuclear structure and function are governed by lamins, which are intermediate filaments mostly consisting of α-helices. Different lamin assembly models have been proposed based on low resolution or fragmented structures. However, their assembly mechanisms at the molecular level are poorly understood. The structure shows the anti-parallel arrangement of two coiled-coil dimers, which is important for the assembly process. We further discovered a new interaction of a coil 2 by using chemical cross-linking and mass analysis, of which the results were deposited in the PRIDE identifier PXD013144. Here we showed that a cysteine-substituted coil 2 R388C segment (286-400 amino acid residues of lamin) was dimerized by the chemical crosslinking. Our findings also provide a molecular basis for the assembly mechanisms of other intermediate filaments.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Culture, Fibroblast

DISEASE(S): Progeria

SUBMITTER: Yong-Hak Kim  

LAB HEAD: Yong-Hak Kim

PROVIDER: PXD014029 | Pride | 2025-12-15

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
coil2-dimer_merge.pep.xml Pepxml
coil2dimer-1.raw Raw
coil2dimer-2.raw Raw
coil2dimer_merge.msf Msf
Items per page:
1 - 4 of 4
altmetric image

Publications

Structural basis for lamin assembly at the molecular level.

Ahn Jinsook J   Jo Inseong I   Kang So-Mi SM   Hong Seokho S   Kim Suhyeon S   Jeong Soyeon S   Kim Yong-Hak YH   Park Bum-Joon BJ   Ha Nam-Chul NC  

Nature communications 20190821 1


Nuclear structure and function are governed by lamins, which are intermediate filaments that mostly consist of α-helices. Different lamin assembly models have been proposed based on low resolution and fragmented structures. However, their assembly mechanisms are still poorly understood at the molecular level. Here, we present the crystal structure of a long human lamin fragment at 3.2 Å resolution that allows the visualization of the features of the full-length protein. The structure shows an an  ...[more]

Similar Datasets

2019-08-26 | PXD013144 | Pride
2019-07-12 | PXD008337 | Pride
2025-06-04 | PXD040771 | Pride
2012-10-30 | E-GEOD-41757 | biostudies-arrayexpress
2013-09-22 | E-GEOD-47553 | biostudies-arrayexpress
2017-05-30 | PXD006459 | Pride
2025-05-25 | PXD054249 | Pride
2013-07-14 | E-GEOD-42522 | biostudies-arrayexpress
2011-12-15 | E-GEOD-26256 | biostudies-arrayexpress
2011-12-15 | GSE26256 | GEO