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Tissue specfic proteome quantitation and Temporal proteome profile of Arabidopsis upon ABA exposure using DIA-MS

ABSTRACT: Use of our recent spectral library, we quantify proteomes of 4 tissue type in arabidopsis, and also the proteomes in response to ABA-treatment. We revealed the temproal profiling of ABA-responding genes.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)

TISSUE(S): Plant Cell, Root, Cell Culture, Leaf, Silique, Stem

SUBMITTER: Huoming Zhang

LAB HEAD: Huoming Zhang

PROVIDER: PXD014032 | Pride | 2019-09-02

REPOSITORIES: Pride

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Arabidopsis proteome and the mass spectral assay library.

Zhang Huoming H Liu Pei P Guo Tiannan T Zhao Huayan H Bensaddek Dalila D Aebersold Ruedi R Xiong Liming L

Scientific data 20191122 1

Arabidopsis is an important model organism and the first plant with its genome completely sequenced. Knowledge from studying this species has either direct or indirect applications for agriculture and human health. Quantitative proteomics by data-independent acquisition mass spectrometry (SWATH/DIA-MS) was recently developed and is considered as a high-throughput, massively parallel targeted approach for accurate proteome quantification. In this approach, a high-quality and comprehensive spectra ...[more]

PMID: 31757973

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