Proteomics

Dataset Information

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Immunopeptidome of an acute myeloid leukemia cell line THP1


ABSTRACT: We report the use of complementary peptide antigen enrichment and comprehensive mass spectrometric acquisition strategies to provide in-depth immunopeptidome data for AML cell line THP1

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Suspension Culture, Monocyte

DISEASE(S): Acute Leukemia

SUBMITTER: Kirti Pandey  

LAB HEAD: Anthony Wayne Purcell

PROVIDER: PXD015039 | Pride | 2020-05-13

REPOSITORIES: Pride

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Publications

In-depth mining of the immunopeptidome of an acute myeloid leukemia cell line using complementary ligand enrichment and data acquisition strategies.

Pandey Kirti K   Mifsud Nicole A NA   Lim Kam Sian Terry C C TCC   Ayala Rochelle R   Ternette Nicola N   Ramarathinam Sri H SH   Purcell Anthony W AW  

Molecular immunology 20200505


The identification of T cell epitopes derived from tumour specific antigens remains a significant challenge for the development of peptide-based vaccines and immunotherapies. The use of mass spectrometry-based approaches (immunopeptidomics) can provide powerful new avenues for the identification of such epitopes. In this study we report the use of complementary peptide antigen enrichment methods and a comprehensive mass spectrometric acquisition strategy to provide in-depth immunopeptidome data  ...[more]

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