Proteomics

Dataset Information

Environmental viscosity modulates interbacterial killing during habitat transition


ABSTRACT: In this study we employed a proteomics method to determine how bacteria respond at the protein level to a transition from a low- to a high-viscosity liquid environment. We applied this method to explore how the symbiotic marine bacterium Vibrio fischeri responds to changes in environmental viscosity associated with the transition from free-living to host-associated states. For this project cultures of ES401 were initially grown in low-viscosity liquid media and then transferred to either fresh low- or high-viscosity liquid media, which was generated by supplementing liquid media with 5% polyvinylpyrrolidone (w/vol). Samples were then incubated for one, 12, or 24 hours, and then collected by centrifugation and cell pellets frozen at -80°C. For each treatment four biological replicates were generated and analyzed.

INSTRUMENT(S):

ORGANISM(S): Aliivibrio Fischeri

SUBMITTER: Fernanda Salvato  

LAB HEAD: Manuel kleiner

PROVIDER: PXD015403 | Pride | 2020-01-07

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
File_description.txt Txt
L-L_12h_3A_400ng_run1.msf Msf
L-L_12h_3A_400ng_run1.pep.xml Pepxml
L-L_12h_3A_400ng_run1.raw Raw
L_L_12h_1A_400ng_run1.msf Msf
Items per page:
1 - 5 of 99
altmetric image

Publications

Sorry, this publication's infomation has not been loaded in the Indexer, please go directly to PUBMED or Altmetric.

Similar Datasets