Proteomics

Dataset Information

0

Characterization of Macrophage Galactose-type Lectin (MGL) ligands in colorectal cancer cell lines


ABSTRACT: Background The Ca2+-dependent C-type lectin receptor Macrophage Galactose-type Lectin (MGL) is highly expressed by tolerogenic dendritic cells (DC) and macrophages. MGL exhibits a high binding specificity for terminal alpha- and beta-linked GalNAc residues found in Tn, sTn and LacdiNAc antigens. These glycan epitopes are often overexpressed in colorectal cancer (CRC), and, as such, MGL can be used to discriminate tumor from the corresponding healthy tissues. Moreover, the high expression of MGL ligands is associated with poor disease-free survival in stage III of CRC tumors. Nonetheless, the glycoproteins expressed by tumor cells that are recognized by MGL have hitherto remained elusive. Methods Using a panel of three CRC cell lines (HCT116, HT29 and LS174T), recapitulating CRC diversity, we performed FACS staining and pull-down assays using a recombinant soluble form of MGL (and a mutant MGL as control) combined with mass spectrometry-based (glyco)proteomics. Results HCT116 and HT29, but not LS174T, are high MGL-binding CRC cell lines. On these cells, the major cell surface binding proteins are receptors (e.g. MET, PTK7, SORL1, PTPRF) and integrins (ITGB1, ITGA3). From these proteins, several N- and/or O-glycopeptides were identified, of which some carried either a LacdiNAc or Tn epitope.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Culture

DISEASE(S): Colon Cancer

SUBMITTER: Yassene Mohammed  

LAB HEAD: Paul J. Hensbergena

PROVIDER: PXD016726 | Pride | 2020-01-09

REPOSITORIES: Pride

altmetric image

Publications

Oncogenic BRAFV600E drives expression of MGL ligands in the colorectal cancer cell line HT29 through N-acetylgalactosamine-transferase 3.

Sahasrabudhe Neha M NM   Lenos Kristiaan K   van der Horst Joost C JC   Rodríguez Ernesto E   van Vliet Sandra J SJ  

Biological chemistry 20180601 7


Colorectal cancer is the third most common cancer type worldwide. It is characterized by a high expression of aberrantly glycosylated ligands, such as the Tn antigen (GalNAcα1-Ser/Thr), which is a major ligand for the C-type lectin macrophage galactose-type lectin (MGL). We have previously determined that a high level of MGL ligands in colorectal tumors is associated with lower disease-free survival in patients with late stage disease, which we could attribute to the presence of oncogenic BRAFV6  ...[more]

Similar Datasets

2020-08-10 | PXD020344 | Pride
2012-01-07 | E-GEOD-34926 | biostudies-arrayexpress
2019-01-02 | PXD011307 | Pride
2013-11-20 | E-GEOD-37596 | biostudies-arrayexpress
2020-10-19 | PXD017510 | Pride
2023-03-11 | PXD037651 | Pride
2011-11-29 | E-GEOD-18560 | biostudies-arrayexpress
2014-12-21 | E-GEOD-50791 | biostudies-arrayexpress
2008-02-29 | E-GEOD-9234 | biostudies-arrayexpress
2021-11-17 | GSE185055 | GEO