Proteomics

Dataset Information

Zirconium(IV)-IMAC for phosphopeptide enrichment in phosphoproteomics


ABSTRACT: IMAC and MOAC magnetic microsphere materials were tested with ug amounts of protein extracts from HepG2/C3A cells. We compared Zirconium (IV) IMAC (Zr-IMAC) magnetic microspheres to commonly used Titanium (IV) IMAC (Ti-IMAC) and TiO2 magnetic microspheres for phosphopeptide enrichment from simple and complex protein samples prior phosphopeptide sequencing and characterization by mass spectrometry (LC-MS/MS). We optimized sample-loading conditions to increase phosphopeptide recovery for Zr-IMAC, Ti-IMAC and TiO2 based workflows. Furthermore, optimized Zr-IMAC and Ti-IMAC magnetic microsphere format were compared to HPLC-based Fe(III)-IMAC for same sample amount (200 ug).

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Hepatocyte, Cell Culture

SUBMITTER: Ignacio Arribas  

LAB HEAD: Ole N. Jensen

PROVIDER: PXD018273 | Pride | 2020-11-26

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Ignacio_A1.wiff Wiff
Ignacio_A1.wiff.scan Wiff
Ignacio_A10.wiff Wiff
Ignacio_A10.wiff.scan Wiff
Ignacio_A11.wiff Wiff
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