Proteomics

Dataset Information

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Targeted proteomics analysis of cortical collecting ducts with Pendrin knockout


ABSTRACT: We analyzed microdissected cortical collecting ducts of pendrin knockouts using a sensitive targeted proteomics approach proteomics approach.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Kidney

SUBMITTER: Markus Rinschen  

LAB HEAD: Markus Rinschen

PROVIDER: PXD018791 | Pride | 2022-04-04

REPOSITORIES: Pride

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Publications

Viewing Cortical Collecting Duct Function Through Phenotype-guided Single-Tubule Proteomics.

Himmerkus Nina N   Svendsen Samuel L SL   Quintanova Catarina C   Bleich Markus M   Von Schwerdtner Otto O   Benzing Thomas T   Welling Paul A PA   Leipziger Jens J   Rinschen Markus M MM  

Function (Oxford, England) 20200702 1


The revolution of the omics technologies has enabled profiling of the molecules of any sample. However, the heterogeneity of the kidney with highly specialized nephron segments like the cortical collecting duct (CCD) poses a challenge regarding integration of omics data and functional analysis. We examined function and proteome from the same single CCDs of C57Bl6 mice by investigating them in a double-barreled perfusion system before targeted mass spectrometry. Transepithelial voltage (V<sub>te<  ...[more]

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