Proteomics study in somatic embryogenesis in avocado

ABSTRACT: To understand the molecular foundation of the SE induction and development in avocado, we compared by proteomics approach, the embryogenic (EC) and non-embryogenic (NEC) cultures of two avocado varieties. Although Criollo and Hass EC exhibits particularities in the proteome and metabolome profile, in general, we observed a more active phenylpropanoid pathway in EC than NEC. Our proteomic pipeline consisted of a peptide labeled with TMT6plex and synchronous precursor selection (SPS) MS3

INSTRUMENT(S):

ORGANISM(S): Persea Americana

TISSUE(S): Cell Suspension Culture, Early Embryonic Cell, Cell Culture

SUBMITTER: Eliel Ruiz-May  

LAB HEAD: Proteomics lab

PROVIDER: PXD019705 | Pride | 2020-08-14

REPOSITORIES: Pride