C. neoformans small peptides SWATH-MS proteomics
Ontology highlight
ABSTRACT:
INSTRUMENT(S): TripleTOF 5600, LTQ Orbitrap Elite
ORGANISM(S): Cryptococcus Neoformans
SUBMITTER: 
Paige Erpf
LAB HEAD: Benjamin Luke Schulz
PROVIDER: PXD022841 | Pride | 2024-02-26
REPOSITORIES: Pride
Publications
Identification and characterisation of sPEPs in Cryptococcus neoformans.
Erpf Paige E PE Chua Sheena M H SMH Phung Toan K TK Kerr Edward D ED Rothnagel Joseph A JA Schulz Benjamin L BL Fraser James A JA
Fungal genetics and biology : FG & B 20220323
Short open reading frame (sORF)-encoded peptides (sPEPs) have been found across a wide range of genomic locations in a variety of species. To date, their identification, validation, and characterisation in the human fungal pathogen Cryptococcus neoformans has been limited due to a lack of standardised protocols. We have developed an enrichment process that enables sPEP detection within a protein sample from this polysaccharide-encapsulated yeast, and implemented proteogenomics to provide insight ...[more]
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