Proteomics

Dataset Information

0

A vast pool of microproteins encoded by long non-coding RNAs in plants


ABSTRACT: Thousands of small open reading frames (smORFs, <100 aa) located on lncRNAs potentially might be translated into peptides or small proteins. We report a comprehensive analysis of the conservation and evolutionary trajectories of smORFs across different plant taxa. For thousands of smORFs, we demonstrate remarkable conservation and significant purifying selection, indicative of their functionality. The expression of the lncRNAs and translation of the smORFs are validated by RNA-sequencing and proteomics, respectively.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Physcomitrella Picea Abies

TISSUE(S): Plant Cell, Protonema

SUBMITTER: Igor Fesenko  

LAB HEAD: Igor Fesenko

PROVIDER: PXD025267 | Pride | 2021-10-05

REPOSITORIES: Pride

Similar Datasets

2021-10-05 | PXD025373 | Pride
2019-07-03 | GSE125218 | GEO
2019-08-08 | PXD007923 | Pride
2020-09-22 | GSE104226 | GEO
2011-11-17 | E-GEOD-32898 | biostudies-arrayexpress
2011-11-17 | E-GEOD-32899 | biostudies-arrayexpress
2021-07-16 | GSE166214 | GEO
2024-01-26 | PXD046452 | Pride
2019-08-08 | PXD007922 | Pride
2011-12-22 | E-GEOD-32880 | biostudies-arrayexpress