Proteomics

Dataset Information

0

Platelet proteome dynamics in hibernating 13-lined ground squirrels


ABSTRACT: Hibernating mammals undergo a dramatic drop in temperature and blood flow during torpor and must suppress hemostasis to avoid stasis blood clotting. In addition, cold storage of most mammalian platelets induces cold storage lesions, resulting in rapid clearance following transfusion. 13-lined ground squirrels (Ictidomys tridecemlineatus) provide a model to study hemostasis and cold storage of platelets during hibernation because, even with a body temperature of 4-8C, their platelets are resistant to cold storage lesions. We quantified and systematically compared proteomes of platelets collected from ground squirrels at summer (activity), fall (entrance), and winter (topor) to elucidate how molecular-level changes in platelets may support hemostatic adaptations in torpor. Platelets were isolated from squirrel blood collected in June, October, and January. Platelet lysates from each animal were digested with trypsin prior to 11-plex tandem mass tag (TMT) labeling, followed by LC-MS/MS analysis for relative protein quantification. We found over 700 platelet proteins with significant changes over the course of entrance, torpor, and activity – including systems of proteins regulating translation, platelet degranulation, metabolism, complement, and coagulation cascades. We also noted species specific differences in hemostatic, secretory, and inflammatory regulators in ground squirrel platelets relative to human platelets. In addition to providing the first ever proteomic characterization of platelets from hibernating animals, our results support a model whereby systematic changes in metabolic, hemostatic, and other proteins support physiological adaptations in torpor. In addition, our results could translate into better methods to cold store human platelets, increasing their supply and quality for transfusions.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Ictidomys Tridecemlineatus Arenicola

TISSUE(S): Blood Platelet, Platelet

SUBMITTER: Phillip Wilmarth  

LAB HEAD: Dr. Scott Cooper

PROVIDER: PXD026903 | Pride | 2021-12-08

REPOSITORIES: Pride

altmetric image

Publications

Platelet proteome dynamics in hibernating 13-lined ground squirrels.

Cooper Scott S   Wilmarth Phillip A PA   Cunliffe Jennifer M JM   Klimek John J   Pang Jiaqing J   Tassi Yunga Samuel S   Minnier Jessica J   Reddy Ashok A   David Larry L   Aslan Joseph E JE  

Physiological genomics 20211022 11


Hibernating mammals undergo a dramatic drop in temperature and blood flow during torpor, yet avoid stasis blood clotting through mechanisms that remain unspecified. The effects of hibernation on hemostasis are especially complex, as cold temperatures generally activate platelets, resulting in platelet clearance and cold storage lesions in the context of blood transfusion. With a hibernating body temperature of 4°C-8°C, 13-lined ground squirrels (<i>Ictidomys tridecemlineatus</i>) provide a model  ...[more]

Similar Datasets

2011-07-07 | E-MTAB-710 | biostudies-arrayexpress
2014-02-04 | E-GEOD-51453 | biostudies-arrayexpress
2014-07-17 | E-GEOD-59488 | biostudies-arrayexpress
2022-07-01 | E-MTAB-9673 | biostudies-arrayexpress
2020-11-20 | PXD017167 | Pride
2018-01-15 | E-MTAB-6148 | biostudies-arrayexpress
2015-09-15 | E-GEOD-65705 | biostudies-arrayexpress
2014-01-01 | E-GEOD-45960 | biostudies-arrayexpress
2012-06-30 | E-MTAB-715 | biostudies-arrayexpress
2013-10-01 | E-MTAB-1846 | biostudies-arrayexpress