Proteomics

Dataset Information

Proteomic analysis of NK3.3-derived extracellular vesicles


ABSTRACT: Our study investigates the features and anti-tumor function of extracellular vesicles (EVs) isolated from our well described NK cell line - NK3.3 - the only published clonal, normal human cell line to date. Natural killer (NK) cells, critical for proper immune function, destroy tumor cells primarily through the release of granules containing potent cytolytic molecules. NK cells also release these molecules within membrane-bound exosomes and microvesicles collectively known as EVs. We show that NK3.3 EVs contain the cytolytic molecules perforin, granzymes A and B, and granulysin, and an array of common EV proteins. We previously showed that the E3 ubiquitin ligase identified by our laboratory, natural killer lytic-associated molecule (NKLAM/RNF19b), is localized to NK granules and is essential for maximal NK killing; our current study shows NKLAM situated within the NK3.3 EV membrane. Analysis of NK3.3 EV contents also identified multiple RNA species including miRNAs associated with anti-tumor activity. We demonstrate that treatment of an array of hematopoietic and non-hematopoietic tumor cell lines with NK3.3 EVs inhibits proliferation and induces apoptosis and cell death while leaving normal cells unaffected. Taken together, our study suggests that NK3.3 EVs have the potential to be effective immunotherapeutic agents.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Blood

SUBMITTER: Allyson Cochran  

LAB HEAD: Dr. Jacki Kornbluth

PROVIDER: PXD027051 | Pride | 2021-09-07

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
MSB35173A.raw Raw
NK3.3_proteome_scaffold_file.mzid.gz Mzid
NK3.3_proteome_scaffold_file.mzid.gz_MSB35173A__F146052_.MGF Mzid
PXD027051_community_annotated.sdrf.tsv Tabular
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