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Frequency of change determines effectiveness of microbial response strategies in sulfidic stream microbiomes

ABSTRACT: Chemostat incubations were established and inoculated with sediments collected from Canyon Creek, Calgary, Alberta, Canada. The chemostats experienced oxic-anoxic change of different frequency, High-frequency, Medium-frequency and Low-frequency. 18 samples were collected at the end of the final oxic phase and the final anoxic phase in the triplicated chemostats for metagenomic and metaproteomic analysis. 26 genomes were assembled from metagenomes. Proteomes were used to investigate translational regulation of each population associated with a genome.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Arenimonas Sp. Acidovorax

SUBMITTER: Angela Kouris

LAB HEAD: Marc Strous

PROVIDER: PXD028583 | Pride | 2023-04-26

REPOSITORIES: Pride

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