Proteomics

Dataset Information

Integrated changes in thermal stability and proteome abundance during altered growth and metabolic cell states.Integrated changes in thermal stability and proteome abundance during altered growth and metabolic cell states.


ABSTRACT: Altered thermal solubility measurement techniques are emerging as powerful tools to assess ligand binding, post-translational modification, protein-protein interactions, and many other cellular processes that affect protein state under various cellular conditions. Thermal solubility or stability profiling techniques are enabled on a global proteomic scale by employing the latest generation of isobaric tagging reagents that facilitate multiplexing capacity required to measure the proteome across thermal gradients. Key among these is thermal proteomic profiling (TPP), which requires 8-10 isobaric tags per gradient and multiple sets of proteomic analyses to measure different replicates and conditions. Furthermore, using thermal profiling techniques to measure protein state across different conditions also requires measurements of difference in protein abundance. Here, we use PISA to assess protein abundance and thermal stability.

INSTRUMENT(S):

ORGANISM(S): Escherichia Coli

SUBMITTER: J Patrick Murphy  

LAB HEAD: J Patrick Murphy

PROVIDER: PXD031800 | Pride | 2024-02-14

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
PXD031800_community_annotated.sdrf.tsv Tabular
a24572.mzML Mzml
a24572.pepXML Pepxml
a24572.raw Raw
a24573.mzML Mzml
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