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Template-based assembly of proteomic short reads for de novo antibody sequencing and repertoire profiling

ABSTRACT: We developed a software package STITCH (https://github.com/snijderlab/stitch) to perform template-based assembly of de novo peptide reads from antibody samples. As a test case we generated de novo peptide reads from protein G purified whole IgG from COVID-19 patients.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Joost Snijder

LAB HEAD: Joost Snijder

PROVIDER: PXD031941 | Pride | 2022-07-21

REPOSITORIES: Pride

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